Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016559 PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.899 chr13 - View
Actinidia chinensis Actinidia19281 Lachesis_group28 - View
Actinidia chinensis Actinidia10240 Lachesis_group26 - View
Avicennia marina MSTRG.22199 ScioBoG_3008_HRSCAF_3015 + View
Avicennia marina MSTRG.24397 ScioBoG_4088_HRSCAF_4107 - View
Amaranthus hybridus Ah.11g039220 Homeobox protein knotted-1-like 2 (KNAP2) AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0VJ2KM PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FU8PR5 PF03789//PF03790//PF03791 - ELK domain (ELK) // KNOX1 domain (KNOX1) // KNOX2 domain (KNOX2) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A8JEVC PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JCQF9U PF03789//PF03790//PF03791 - ELK domain (ELK) // KNOX1 domain (KNOX1) // KNOX2 domain (KNOX2) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT4G08150 homeobox knotted-like protein A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl%2C in the region that would become style%2C particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. KNOTTED-like from Arabidopsis thaliana (KNAT1)%3B CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541)%2C ELK (InterPro:IPR005539)%2C Homeobox (InterPro:IPR001356)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C KNOX1 (InterPro:IPR005540)%2C Homeodomain-like (InterPro:IPR009057)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1)%3B Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4%3B Bacteria - 107%3B Metazoa - 2529%3B Fungi - 972%3B Plants - 3913%3B Viruses - 2%3B Other Eukaryotes - 23743 (source: NCBI BLink). Chr4 - View
Beta vulgaris EL10Ac1g02334 PTHR11850//PTHR11850:SF64 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G416.42 PGAv.1.6.scaffold416 - View
Coffea canephora Cc10_g07850 Homeotic protein knotted-1 chr10 - View
Citrus clementina Ciclev10001508m.g scaffold_5 - View
Ceratophyllum demersum CDE01G0469 11 - View
Ceratophyllum demersum CDE02G3223 1 - View
Ceratophyllum demersum CDE06G2668 4 + View
Ceratophyllum demersum CDE04G0701 2 + View
Cardamine hirsuta CARHR259260 Knotted-like homeobox protein Chr8 - View
Citrullus lanatus ClCG08G016810 Homeobox protein CG_Chr08 - View
Citrullus lanatus ClCG05G017660 Homeobox protein CG_Chr05 - View
Cucumis melo MELO3C016850.2 homeobox protein knotted-1-like 2 chr07 + View
Cucumis melo MELO3C010775.2 Homeobox transcription factor KN4 chr03 - View
Carica papaya Cpa.g.sc160.20 supercontig_160 + View
Chenopodium quinoa AUR62034981 Homeobox protein knotted-1-like 2 C_Quinoa_Scaffold_1319 - View
Chenopodium quinoa AUR62039334 Protein of unknown function C_Quinoa_Scaffold_1932 + View
Cucumis sativus L. CsaV3_2G025810 Homeobox protein knotted-1-like 1 chr2 + View
Cucumis sativus L. CsaV3_4G035390 Homeobox protein knotted-1-like 1 chr4 - View
Daucus carota DCAR_012830 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_019342 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv01227 GWHABJS00000011 + View
Davidia involucrata Dinv44917 GWHABJS00000002 + View
Durio zibethinus Duzib093G2177 NW_019167937.1 + View
Durio zibethinus Duzib041G0151 NW_019167826.1 - View
Durio zibethinus Duzib116G0024 NW_019167949.1 - View
Erigeron canadensis ECA246G2427 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F00106 Chr06 + View
Erythranthe guttata Migut.N02807 scaffold_14 - View
Eutrema salsugineum Thhalv10028724m.g PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 scaffold_3 + View
Fragaria x ananassa FAN20G2736 PTHR11850//PTHR11850:SF64 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Fvb2-3 - View
Fragaria x ananassa FAN15G2645 PTHR11850//PTHR11850:SF64 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Fvb2-4 + View
Fragaria x ananassa FAN24G2287 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Fvb2-2 - View
Fragaria x ananassa FAN27G2097 PTHR11850//PTHR11850:SF64 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Fvb2-1 + View
Fragaria vesca FvH4_2g32400 PTHR11850//PTHR11850:SF64 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Fvb2 + View
Gossypium hirsutum Gohir.A02G079600 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 A02 + View
Gossypium hirsutum Gohir.A06G027200 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 A06 - View
Gossypium hirsutum Gohir.D02G087500 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 D02 + View
Gossypium hirsutum Gohir.A05G213100 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 A05 - View
Gossypium hirsutum Gohir.D06G024500 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 D06 - View
Gossypium hirsutum Gohir.D05G216500 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 D05 - View
Glycine max Glyma.04G049500 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Gm04 - View
Glycine max Glyma.14G091200 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Gm14 - View
Glycine max Glyma.17G232205 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Gm17 + View
Gossypium raimondii Gorai.009G223200 Chr09 - View
Gossypium raimondii Gorai.005G098100 Chr05 + View
Gossypium raimondii Gorai.010G029000 Chr10 - View
Lupinus albus Lalb_Chr14g0367951 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Lalb_Chr14 + View
Lupinus albus Lalb_Chr23g0267711 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Lalb_Chr23 - View
Lupinus albus Lalb_Chr22g0355891 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Lalb_Chr22 - View
Lotus japonicus Lj5g0012934 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 chr5 + View
Lonicera japonica Lj4C78G5 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_6_108340 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Lsat_1_v8_lg_6 + View
Magnolia biondii MBI16_g46692_MAGBIO AED:0.00 Chr16 - View
Malus domestica MD15G1062700 KNOTTED-like from Arabidopsis thaliana Chr15 + View
Malus domestica MD08G1075200 KNOTTED-like from Arabidopsis thaliana Chr08 + View
Manihot esculenta Manes.05G184900 Chromosome05 - View
Manihot esculenta Manes.18G052901 Chromosome18 - View
Medicago truncatula Medtr1g017080 homeobox knotted-like protein chr1 + View
Nelumbo nucifera Nn6g34558 chr6 - View
Nelumbo nucifera Nn5g30694 chr5 - View
Olea europaea Oeu053667.3 scaffold65 + View
Oryza sativa ssp. japonica Os03g0727000 Knotted1-like homeobox protein, Shoot apical meristem maintenance, Embryogenesis Similar to Homeobox protein. chr03 - View
Oryza sativa ssp. japonica Os03g0771500 Similar to Isoform 2 of Homeobox protein knotted-1-like 8. chr03 + View
Petunia axillaris Peaxi162Scf00628g00311 Homeobox protein knotted-1-like 2 Peaxi162Scf00628 - View
Punica granatum PGR083G0232 NC_045133.1 + View
Prunus persica Prupe.1G416700 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Pp01 + View
Papaver somniferum PSO541G1820 NC_039363.1 + View
Papaver somniferum PSO675G3958 NC_039358.1 + View
Populus trichocarpa Potri.002G113300 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Chr02 + View
Phaseolus vulgaris Phvul.001G032200 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Chr01 - View
Rosa chinensis RcHm_v2.0_Chr6g0310301 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold28G11847 scaffold28 - View
Salvia bowleyana SalBow7G4076 GWHASIU00000005 - View
Salix brachista Sabra02G0089800 GWHAAZH00000002 + View
Simmondsia chinensis Sc02g0008280 GWHAASQ00000002 - View
Simmondsia chinensis Sc26g0004260 GWHAASQ00000026 + View
Sechium edule Sed0008933 LG11 + View
Sechium edule Sed0020752 LG13 - View
Sechium edule Sed0018694 LG11 + View
Solanum lycopersicum Solyc04g077210.3 Knotted 1 SL4.0ch04 + View
Schrenkiella parvula Sp6g10130 PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 ch6-3 + View
Solanum tuberosum PGSC0003DMG400004953 Homeotic protein knotted-1 ST4.03ch04 + View
Selenicereus undatus Hund05256 Scaffold_19641 + View
Trochodendron aralioides TAR381G1392 group11 - View
Trochodendron aralioides TAR376G0473 group14 + View
Trochodendron aralioides TAR628G1242 group5 + View
Theobroma cacao Thecc.08G081900 KNOTTED-like from Chromosome_8 + View
Tarenaya hassleriana THA.LOC104806966 homeobox protein knotted-1-like 1 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104825802 homeobox protein knotted-1-like 1 NW_010967605.1 + View
Tripterygium wilfordii TWI12G0165 NC_052243.1 - View
Tripterygium wilfordii TWI56G0557 NC_052242.1 + View
Utricularia gibba unitig_8.g4861 unitig_8 - View
Vaccinium macrocarpon vmacro21400 Similar to KN1: Homeotic protein knotted-1 (Solanum lycopersicum OX%3D4081) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0755 CM024073.1 - View
Vitis vinifera GSVIVG01009273001 chr18 + View
Zea mays Zm00001eb299420 Zm00001e032761 HB transcription factor rough sheath1 7 + View
Zea mays Zm00001eb055920 Zm00001e005545 Homeobox protein OSH1 Homeotic protein knotted-1 1 - View