Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G11460 scaffold_3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G13960 LG-11 - View
Aethionema arabicum Aa31LG2G3820 LG-2 - View
Aethionema arabicum Aa31LG5G12740 LG-5 - View
Acer truncatum Atru.chr8.529 chr8 + View
Actinidia chinensis Actinidia17597 Lachesis_group21 + View
Actinidia chinensis Actinidia18071 Lachesis_group11 + View
Actinidia chinensis Actinidia36263 Lachesis_group4 + View
Actinidia chinensis Actinidia26261 Lachesis_group3 + View
Avicennia marina MSTRG.9590 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.23865 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.3369 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.2981 ScioBoG_102835_HRSCAF_103059 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B798EQ PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FK15VW PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LA1S8R PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XMS8ZM PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT3G02210 COBRA-like protein 1 precursor COBRA-like protein 1 precursor (COBL1)%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like protein 2 precursor (TAIR:AT3G29810.1)%3B Has 380 Blast hits to 369 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 380%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family%2C similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. IRREGULAR XYLEM 6 (IRX6)%3B INVOLVED IN: secondary cell wall biogenesis%3B LOCATED IN: plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1)%3B Has 379 Blast hits to 368 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 379%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g05036 ChrB01 - View
Brassica carinata BcaC04g18946 ChrC04 - View
Brassica carinata BcaC05g30333 ChrC05 - View
Brassica carinata BcaC06g30855 ChrC06 - View
Brassica napus A03p07260 A03 + View
Brassica napus C02p07850 C02 + View
Brassica napus C09p75590 C09 - View
Brassica napus C03p08340 C03 + View
Brassica napus A05p45090 A05 - View
Brassica napus A06p39810 A06 - View
Brassica napus A02p03130 A02 + View
Brassica napus A10p23340 A10 - View
Brassica napus C09p61480 C09 - View
Brassica oleracea BolC3t13340H C3 + View
Brassica oleracea BolC2t06711H C2 + View
Brassica oleracea BolC5t35099H C5 + View
Brassica rapa BraA10t44402Z A10 - View
Brassica rapa BraA03t10048Z A03 + View
Brassica rapa BraA02t05283Z A02 + View
Brassica rapa BraA05t23152Z A05 + View
Brassica rapa BraA06t26896Z A06 - View
Camellia sinensis var. sinensis CSS0034060 PREDICTED: protein COBRA-like [Sesamum indicum] Chr2 + View
Capsicum annuum CAN.G497.83 PGAv.1.6.scaffold497 + View
Cannabis sativa CANSAT64G0169 NC_044379.1 + View
Corylus avellana Haze_14395 Similar to BC1LP1: COBRA-like protein 7 (Oryza sativa subsp. japonica OX%3D39947) 5 + View
Citrus clementina Ciclev10021527m.g scaffold_3 + View
Ceratophyllum demersum CDE10G0565 8 - View
Ceratophyllum demersum CDE04G2904 2 - View
Carpinus fangiana Cfa007681 Cfa03 + View
Cardamine hirsuta CARHR076180 Protein COBRA, putative Chr3 - View
Cardamine hirsuta CARHR197690 COBRA-like protein Chr6 - View
Carya illinoinensis CiPaw.03G084500 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Chr03 + View
Chenopodium quinoa AUR62009493 Protein of unknown function C_Quinoa_Scaffold_3674 + View
Chenopodium quinoa AUR62023171 COBL4: COBRA-like protein 4 C_Quinoa_Scaffold_1189 + View
Chenopodium quinoa AUR62039659 COB: Protein COBRA C_Quinoa_Scaffold_1452 + View
Capsella rubella Carub.0006s1378 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 scaffold_6 + View
Capsella rubella Carub.0003s0133 PF04833 - COBRA-like protein (COBRA) scaffold_3 - View
Daucus carota DCAR_025446 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv34917 GWHABJS00000012 + View
Davidia involucrata Dinv33853 GWHABJS00000014 + View
Durio zibethinus Duzib211G0487 NW_019168049.1 + View
Erigeron canadensis ECA232G2665 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G1822 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.K02540 Chr11 + View
Eucalyptus grandis Eucgr.J01392 Chr10 + View
Eucalyptus grandis Eucgr.B00628 Chr02 + View
Erythranthe guttata Migut.D01624 scaffold_4 + View
Eutrema salsugineum Thhalv10004232m.g PF04833 - COBRA-like protein (COBRA) scaffold_6 - View
Eutrema salsugineum Thhalv10013604m.g PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 scaffold_2 + View
Eutrema salsugineum Thhalv10020716m.g PF04833 - COBRA-like protein (COBRA) scaffold_13 + View
Fragaria x ananassa FAN14G0201 PF04833 - COBRA-like protein (COBRA) Fvb6-1 + View
Fragaria x ananassa FAN18G0024 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Fvb5-1 + View
Fragaria x ananassa FAN02G0367 PF04833 - COBRA-like protein (COBRA) Fvb6-4 - View
Fragaria x ananassa FAN09G3481 PF04833 - COBRA-like protein (COBRA) Fvb6-2 + View
Fragaria vesca FvH4_6g46460 PF04833 - COBRA-like protein (COBRA) Fvb6 + View
Gossypium hirsutum Gohir.D11G165400 PF04833 - COBRA-like protein (COBRA) D11 + View
Gossypium hirsutum Gohir.D03G097400 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 D03 - View
Gossypium hirsutum Gohir.A03G071000 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 A03 - View
Glycine max Glyma.13G053200 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Gm13 + View
Glycine max Glyma.08G249700 PF04833 - COBRA-like protein (COBRA) Gm08 + View
Glycine max Glyma.19G033500 PF04833 - COBRA-like protein (COBRA) Gm19 + View
Glycine max Glyma.18G271900 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Gm18 + View
Glycine max Glyma.05G019101 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Gm05 - View
Gossypium raimondii Gorai.003G102500 Chr03 - View
Gossypium raimondii Gorai.007G176300 Chr07 + View
Helianthus annuus HanXRQChr15g0488991 Putative COBRA, plant HanXRQChr15 + View
Lupinus albus Lalb_Chr21g0318181 PF04833 - COBRA-like protein (COBRA) Lalb_Chr21 + View
Lupinus albus Lalb_Chr10g0092781 PTHR31673//PTHR31673:SF3 - FAMILY NOT NAMED // COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Lalb_Chr10 - View
Lotus japonicus Lj2g0024823 PF04833 - COBRA-like protein (COBRA) chr2 - View
Lonicera japonica Lj4A121G74 GWHAAZE00000004 + View
Lonicera japonica Lj5A135T37 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_2_89561 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_4_173220 PF04833 - COBRA-like protein (COBRA) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI19_g06125_MAGBIO AED:0.25 Chr19 - View
Malus domestica MD14G1214800 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Chr14 + View
Malus domestica MD06G1203700 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Chr06 + View
Manihot esculenta Manes.06G082300 Chromosome06 + View
Manihot esculenta Manes.14G087750 Chromosome14 + View
Nicotiana tabacum Nitab4.5_0000212g0310 COBRA, plant Nitab4.5_0000212 + View
Olea europaea Oeu007075.1 scaffold126 + View
Olea europaea Oeu004421.1 chr7 - View
Oryza sativa ssp. japonica Os07g0604300 A member of the COBRA-like protein family, Modulation of β-glucan synthesis during endosperm cell wall formation chr07 + View
Petunia axillaris Peaxi162Scf00166g00335 COBRA-like protein 4 Peaxi162Scf00166 + View
Punica granatum PGR083G0818 NC_045133.1 + View
Punica granatum PGR044G1428 NC_045134.1 + View
Prunus persica Prupe.5G207800 PF04833 - COBRA-like protein (COBRA) Pp05 + View
Prunus persica Prupe.3G250300 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Pp03 + View
Populus trichocarpa Potri.017G098600 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr17 + View
Rhododendron simsii Rhsim10G0055500 chr10 + View
Rhododendron simsii Rhsim08G0076100 chr08 + View
Striga asiatica SGA_v2.0_scaffold154G37125 scaffold154 + View
Striga asiatica SGA_v2.0_scaffold148G36430 scaffold148 + View
Salix brachista Sabra04G0070500 GWHAAZH00000004 + View
Salix brachista Sabra17G0085000 GWHAAZH00000017 + View
Salix brachista Sabra15G0085300 GWHAAZH00000015 + View
Simmondsia chinensis Sc10g0000670 GWHAASQ00000010 + View
Simmondsia chinensis Sc11g0008740 GWHAASQ00000011 + View
Solanum lycopersicum Solyc02g065765.1 COBRA-like protein (AHRD V3.3 *** K4B708_SOLLC) SL4.0ch02 - View
Schrenkiella parvula Sp6g28480 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 ch6-6 - View
Schrenkiella parvula Sp3g01280 PF04833 - COBRA-like protein (COBRA) ch3-1 - View
Schrenkiella parvula Sp2g18070 PF04833 - COBRA-like protein (COBRA) ch2-4 + View
Solanum pennellii Sopen02g015980 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400001465 Protein COBRA ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400024530 Protein COBRA ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400026565 Protein COBRA ST4.03ch02 - View
Trochodendron aralioides TAR622G1167 group8 - View
Trochodendron aralioides TAR629G1899 group0 + View
Tarenaya hassleriana THA.LOC104802979 COBRA-like protein 1 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104805521 COBRA-like protein 2 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104820989 COBRA-like protein 4 NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104822322 COBRA-like protein 1 isoform X1 NW_010966665.1 + View
Tripterygium wilfordii TWI60G0587 NC_052246.1 + View
Tripterygium wilfordii TWI32G0175 NC_052254.1 + View
Tripterygium wilfordii TWI15G0855 NC_052247.1 + View
Vaccinium macrocarpon vmacro05622 Similar to COB: Protein COBRA (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18136 Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0644 CM024070.1 + View
Vitis vinifera GSVIVG01036565001 chr14 + View
Zea mays Zm00001eb326990 Zm00001e035504 Brittle stalk-2-like protein 6 Protein COBRA 7 + View