Functional Clusters
Cluster information
- Cluster identifier CH_ath_34
- Chromosome Chr1
- E-value 5.64837e-18
- Data type InterPro
- Data identifier IPR038538
- Data description MTERF superfamily, mitochondrial/chloroplastic
-
Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D000125 | 2751 | 144 | 1 | 82 |
| HOM05D000147 | 2513 | 18 | 1 | 100 |
| HOM05D000161 | 2285 | 19 | 9 | 100 |
| HOM05D000698 | 816 | 9 | 1 | 99 |
| HOM05D001191 | 524 | 5 | 1 | 100 |
| HOM05D001785 | 366 | 2 | 1 | 100 |
| HOM05D007037 | 114 | 1 | 1 | 67 |
| HOM05D008464 | 53 | 5 | 3 | 11 |
| HOM05D012039 | 15 | 1 | 1 | 7 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | AT1G08447 | RNA gene | |
| X | AT1G08453 | RNA gene | |
| X | AT1G08457 | RNA gene | |
| X | AT1G08463 | RNA gene | |
| X | AT1G08473 | RNA gene | |
| X | AT1G09725 | RNA gene | |
| V | AT1G61960 | Coding gene | HOM05D000161 |
| V | AT1G61970 | Coding gene | HOM05D000161 |
| V | AT1G61980 | Coding gene | HOM05D000161 |
| V | AT1G61990 | Coding gene | HOM05D000161 |
| X | AT1G62000 | Coding gene | HOM05D008464 |
| V | AT1G62010 | Coding gene | HOM05D000161 |
| X | AT1G62020 | Coding gene | HOM05D001785 |
| X | AT1G62030 | Coding gene | HOM05D000125 |
| X | AT1G62035 | RNA gene | |
| X | AT1G62040 | Coding gene | HOM05D000698 |
| X | AT1G62045 | Coding gene | HOM05D007037 |
| X | AT1G62050 | Coding gene | HOM05D001191 |
| X | AT1G62055 | Pseudo gene | |
| X | AT1G62060 | Coding gene | HOM05D008464 |
| X | AT1G62070 | Coding gene | HOM05D012039 |
| X | AT1G62075 | Transposon | |
| X | AT1G62080 | Coding gene | HOM05D008464 |
| V | AT1G62085 | Coding gene | HOM05D000161 |
| X | AT1G62090 | Pseudo gene | |
| X | AT1G62095 | Pseudo gene | |
| V | AT1G62110 | Coding gene | HOM05D000161 |
| V | AT1G62120 | Coding gene | HOM05D000161 |
| X | AT1G62130 | Coding gene | HOM05D000147 |
| V | AT1G62150 | Coding gene | HOM05D000161 |
| X | AT1TE75540 | Transposon | |
| X | AT1TE75580 | Transposon | |
| X | AT1TE75620 | Transposon | |
| X | AT1TE75650 | Transposon | |
| X | ath-miR171c-3p | RNA gene | |
| X | ath-miR171c-5p | RNA gene |