Functional Clusters

Cluster information

  • Cluster identifier CH_lsa_317
  • Chromosome Lsat_1_v8_lg_9
  • E-value 0.0000391186
  • Data type MapMan
  • Data identifier 16.11.3.3.4.6
  • Data description RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF8-group)
  • Overview Clusters table overview
    Clusters chromosomal overview

Gene Family Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM05D000001 35287 313 3 100
HOM05D000032 5307 60 1 100
HOM05D000087 3607 48 2 99
HOM05D000166 2250 27 5 98
HOM05D000234 1784 33 1 99
HOM05D000243 1731 19 1 96
HOM05D000284 1539 21 1 99
HOM05D000324 1429 27 1 100
HOM05D000457 1151 10 1 100
HOM05D000607 932 10 2 90
HOM05D000650 875 7 1 97
HOM05D000987 610 5 1 96
HOM05D001184 526 11 1 100
HOM05D001195 523 12 1 97
HOM05D001292 485 15 1 98
HOM05D002056 323 8 1 99
HOM05D002069 321 118 1 7
HOM05D002233 301 5 3 93
HOM05D002859 242 3 1 93
HOM05D003404 201 10 1 97
HOM05D004503 160 21 1 96
HOM05D005206 145 1 1 100
HOM05D005817 134 1 1 95
HOM05D005857 134 2 1 78
HOM05D008525 51 51 1 1
HOM05D022568 5 5 1 1
HOM05D033479 3 3 1 1
HOM05D067612 2 2 1 1
HOM05D118516 1 1 1 1
HOM05D201765 1 1 1 1

Gene Information

In cluster Gene id Gene type Gene family
X Lsat_1_v5_gn_9_81421 Coding gene HOM05D000607
X Lsat_1_v5_gn_9_81441 Coding gene HOM05D000607
X Lsat_1_v5_gn_9_81461 Coding gene HOM05D201765
X Lsat_1_v5_gn_9_81480 Coding gene HOM05D000166
X Lsat_1_v5_gn_9_81501 Coding gene HOM05D000166
X Lsat_1_v5_gn_9_81521 Coding gene HOM05D022568
X Lsat_1_v5_gn_9_81561 Coding gene HOM05D000166
X Lsat_1_v5_gn_9_81581 Coding gene HOM05D000166
X Lsat_1_v5_gn_9_81600 Coding gene HOM05D001292
X Lsat_1_v5_gn_9_81620 Coding gene HOM05D000324
X Lsat_1_v5_gn_9_81640 Coding gene HOM05D000001
X Lsat_1_v5_gn_9_81761 Coding gene HOM05D000166
X Lsat_1_v5_gn_9_81781 Coding gene HOM05D002233
X Lsat_1_v5_gn_9_81801 Coding gene HOM05D002233
X Lsat_1_v5_gn_9_81821 Coding gene HOM05D002233
X Lsat_1_v5_gn_9_81840 Coding gene HOM05D002056
X Lsat_1_v5_gn_9_81860 Coding gene HOM05D004503
X Lsat_1_v5_gn_9_81901 Coding gene HOM05D000457
X Lsat_1_v5_gn_9_82641 Coding gene HOM05D000001
X Lsat_1_v5_gn_9_82781 Coding gene HOM05D033479
X Lsat_1_v5_gn_9_82821 Coding gene HOM05D008525
X Lsat_1_v5_gn_9_82841 Coding gene HOM05D000001
X Lsat_1_v5_gn_9_83041 Coding gene HOM05D000234
X Lsat_1_v5_gn_9_83061 Coding gene HOM05D002859
X Lsat_1_v5_gn_9_83080 Coding gene HOM05D002069
X Lsat_1_v5_gn_9_83120 Coding gene HOM05D067612
X Lsat_1_v5_gn_9_83140 Coding gene HOM05D000650
X Lsat_1_v5_gn_9_83160 Coding gene HOM05D001195
X Lsat_1_v5_gn_9_83180 Coding gene HOM05D005857
X Lsat_1_v5_gn_9_83200 Coding gene HOM05D005206
X Lsat_1_v5_gn_9_83240 Coding gene HOM05D000087
X Lsat_1_v5_gn_9_83260 Coding gene HOM05D000087
X Lsat_1_v5_gn_9_83280 Coding gene HOM05D000987
X Lsat_1_v5_gn_9_83300 Coding gene HOM05D001184
X Lsat_1_v5_gn_9_83321 Coding gene HOM05D000284
X Lsat_1_v5_gn_9_83341 Coding gene HOM05D005817
X Lsat_1_v5_gn_9_83361 Coding gene HOM05D003404
X Lsat_1_v5_gn_9_83381 Coding gene HOM05D118516
X Lsat_1_v5_gn_9_83400 Coding gene HOM05D000032
X Lsat_1_v5_gn_9_83421 Coding gene HOM05D000243