Functional Clusters
Cluster information
- Cluster identifier CH_shi_133
- Chromosome scaffold54_3822261
- E-value 0.000111647
- Data type MapMan
- Data identifier 21.3.5.1.2
- Data description Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT3)
-
Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D002070 | 321 | 6 | 3 | 92 |
| HOM05D000392 | 1262 | 669 | 7 | 41 |
| HOM05D088465 | 1 | 1 | 1 | 1 |
| HOM05D008459 | 53 | 53 | 1 | 1 |
| HOM05D000648 | 879 | 861 | 1 | 6 |
| HOM05D004959 | 150 | 3 | 3 | 93 |
| HOM05D000004 | 19584 | 3357 | 3 | 91 |
| HOM05D306780 | 1 | 1 | 1 | 1 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| V | SHI28129 | Coding gene | HOM05D002070 |
| X | SHI28130 | Coding gene | HOM05D000392 |
| X | SHI28131 | Coding gene | HOM05D000392 |
| X | SHI28132 | Coding gene | HOM05D000392 |
| X | SHI28133 | Coding gene | HOM05D000392 |
| X | SHI28134 | Coding gene | HOM05D000392 |
| V | SHI28135 | Coding gene | HOM05D002070 |
| X | SHI28136 | Coding gene | HOM05D088465 |
| X | SHI28137 | Coding gene | HOM05D008459 |
| X | SHI28138 | Coding gene | HOM05D000648 |
| X | SHI28139 | Coding gene | HOM05D004959 |
| X | SHI28140 | Coding gene | HOM05D004959 |
| X | SHI28141 | Coding gene | HOM05D004959 |
| X | SHI28142 | Coding gene | HOM05D000392 |
| X | SHI28143 | Coding gene | HOM05D000392 |
| X | SHI28144 | Coding gene | HOM05D000004 |
| X | SHI28145 | Coding gene | HOM05D000004 |
| X | SHI28146 | Coding gene | HOM05D000004 |
| X | SHI28147 | Coding gene | HOM05D306780 |
| V | SHI28148 | Coding gene | HOM05D002070 |