Functional clusters
Information
- Type InterPro
- Description SPARK domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_1447 | 3 | 13 | 0.000734016 |
| Camellia sinensis var. sinensis | Chr13 | 5 | CH_camsi_800 | 3 | 4 | 0.000010292 |
| Coffea canephora | chr2 | 5 | CH_ccan_287 | 3 | 22 | 0.0000119791 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_539 | 3 | 4 | 0.0000408047 |
| Daucus carota | DCARv2_Chr1 | 5 | CH_dca_83 | 5 | 5 | 0.0000000000065941 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_846 | 3 | 3 | 0.00000146957 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_411 | 4 | 7 | 0.0000000442842 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1407 | 3 | 3 | 0.00000473458 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_355 | 6 | 8 | 0.00000000000000937529 |
| Vigna mungo | CM024073.1 | 5 | CH_vmu_142 | 4 | 6 | 0.0000000288731 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_1447 | 3 | 13 | 0.000734016 |
| Camellia sinensis var. sinensis | Chr13 | 6 | CH_camsi_800 | 3 | 4 | 0.000010292 |
| Coffea canephora | chr2 | 6 | CH_ccan_287 | 3 | 22 | 0.0000119791 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_539 | 3 | 4 | 0.0000408047 |
| Daucus carota | DCARv2_Chr1 | 6 | CH_dca_83 | 5 | 5 | 0.0000000000065941 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_846 | 3 | 3 | 0.00000146957 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_411 | 4 | 7 | 0.0000000442842 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1407 | 3 | 3 | 0.00000473458 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_355 | 6 | 8 | 0.00000000000000937529 |
| Vigna mungo | CM024073.1 | 6 | CH_vmu_142 | 4 | 6 | 0.0000000288731 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |