Functional clusters
Information
- Type InterPro
- Description Alpha/Beta hydrolase fold
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-7 | 5 | CH_aar_120 | 7 | 8 | 0.0000000122974 |
| Acer truncatum | chr13 | 5 | CH_acertr_199 | 13 | 59 | 0.00000000814253 |
| Acer truncatum | chr3 | 5 | CH_acertr_962 | 4 | 4 | 0.000638672 |
| Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_634 | 4 | 4 | 0.000524182 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_708 | 7 | 29 | 0.000962193 |
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_309 | 10 | 60 | 0.000056525 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_445 | 8 | 69 | 0.000128323 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 5 | CH_atr_174 | 6 | 6 | 0.00000001687 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 5 | CH_atr_39 | 14 | 22 | 2.32821e-19 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 5 | CH_atr_446 | 4 | 4 | 0.000196063 |
| Amborella trichopoda | AmTr_v1.0_scaffold00114 | 5 | CH_atr_671 | 4 | 5 | 0.000972988 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1402 | 10 | 74 | 0.000111321 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1862 | 4 | 4 | 0.000567017 |
| Brassica napus | A01 | 5 | CH_bna_1457 | 4 | 4 | 0.000735849 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_444 | 4 | 4 | 0.000297618 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_87 | 8 | 9 | 0.0000000000307091 |
| Coffea canephora | chr5 | 5 | CH_ccan_448 | 4 | 11 | 0.0000783862 |
| Coffea canephora | chr2 | 5 | CH_ccan_641 | 5 | 52 | 0.000503573 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_445 | 5 | 6 | 0.0000368523 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 5 | CH_cqu_1046 | 4 | 4 | 0.000903158 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_629 | 4 | 4 | 0.000672385 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_257 | 9 | 36 | 0.00000488469 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_183 | 9 | 20 | 0.0000000355225 |
| Davidia involucrata | GWHABJS00000021 | 5 | CH_din_138 | 8 | 9 | 0.0000000000406752 |
| Davidia involucrata | GWHABJS00000002 | 5 | CH_din_399 | 7 | 18 | 0.0000130593 |
| Davidia involucrata | GWHABJS00000007 | 5 | CH_din_701 | 4 | 4 | 0.000435452 |
| Durio zibethinus | NW_019167937.1 | 5 | CH_dzi_332 | 7 | 19 | 0.0000173535 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_59 | 27 | 46 | 1.59172e-32 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_807 | 11 | 40 | 0.000000782721 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_258 | 12 | 56 | 0.0000000122753 |
| Gossypium hirsutum | A03 | 5 | CH_ghi_834 | 5 | 6 | 0.0000726287 |
| Gossypium hirsutum | D02 | 5 | CH_ghi_835 | 5 | 6 | 0.0000726287 |
| Gossypium raimondii | Chr12 | 5 | CH_gra_537 | 10 | 68 | 0.000208234 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_24 | 16 | 16 | 1.43204e-27 |
| Lupinus albus | Lalb_Chr14 | 5 | CH_lal_115 | 7 | 7 | 0.00000000142348 |
| Lonicera japonica | GWHAAZE00000094 | 5 | CH_lonja_1098 | 5 | 7 | 0.000370319 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_1113 | 7 | 22 | 0.00049594 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_339 | 7 | 7 | 0.00000000349316 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_38 | 23 | 28 | 4.64218e-34 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_59 | 21 | 31 | 1.08732e-27 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_522 | 6 | 9 | 0.0000102895 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_839 | 5 | 8 | 0.000567089 |
| Malus domestica | Chr08 | 5 | CH_mdo_1062 | 9 | 54 | 0.000205258 |
| Malus domestica | Chr07 | 5 | CH_mdo_186 | 9 | 12 | 0.0000000000124207 |
| Malus domestica | Chr05 | 5 | CH_mdo_428 | 6 | 6 | 0.0000000571496 |
| Malus domestica | Chr16 | 5 | CH_mdo_725 | 11 | 72 | 0.0000100153 |
| Malus domestica | Chr15 | 5 | CH_mdo_804 | 11 | 79 | 0.0000280838 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_226 | 6 | 8 | 0.000000400755 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_479 | 4 | 4 | 0.000208453 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_462 | 6 | 13 | 0.0000487862 |
| Petunia axillaris | Peaxi162Scf00016 | 5 | CH_pax_354 | 6 | 10 | 0.0000211608 |
| Prunus persica | Pp01 | 5 | CH_ppe_468 | 10 | 49 | 0.00000764423 |
| Papaver somniferum | NW_020618825.1 | 5 | CH_pso_568 | 5 | 5 | 0.000000832769 |
| Quercus lobata | 3 | 5 | CH_qlo_1496 | 11 | 75 | 0.000157522 |
| Quercus lobata | 7 | 5 | CH_qlo_1811 | 5 | 8 | 0.000798444 |
| Quercus lobata | CM012294 | 5 | CH_qlo_673 | 12 | 44 | 0.0000000126821 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_537 | 12 | 69 | 0.0000000529119 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_339 | 12 | 51 | 0.0000000126147 |
| Striga asiatica | scaffold90 | 5 | CH_sas_45 | 7 | 11 | 0.000000085828 |
| Salix brachista | GWHAAZH00000005 | 5 | CH_sbr_613 | 5 | 8 | 0.000381832 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_493 | 13 | 35 | 0.00000000000164788 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_22 | 22 | 40 | 7.56894e-28 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_368 | 6 | 7 | 0.000000632052 |
| Schrenkiella parvula | ch4-2 | 5 | CH_spa_176 | 5 | 5 | 0.00000665827 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_7 | 22 | 35 | 1.07523e-32 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_830 | 7 | 34 | 0.000632873 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_5 | 30 | 50 | 1.69071e-43 |
| Selenicereus undatus | Scaffold_33673 | 5 | CH_sun_132 | 7 | 20 | 0.00000741384 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_377 | 10 | 49 | 0.0000103913 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_381 | 6 | 10 | 0.0000319288 |
| Vanilla planifolia | CM028153.1 | 5 | CH_vpl_647 | 7 | 29 | 0.000450298 |
| Vitis vinifera | chr3 | 5 | CH_vvi_185 | 14 | 58 | 0.000000000837581 |
| Vitis vinifera | chr10 | 5 | CH_vvi_484 | 5 | 6 | 0.0000690156 |
| Zea mays | 7 | 5 | CH_zma_31 | 13 | 19 | 5.99157e-17 |
| Aethionema arabicum | LG-7 | 6 | CH_aar_120 | 7 | 8 | 0.0000000122974 |
| Acer truncatum | chr13 | 6 | CH_acertr_199 | 13 | 59 | 0.00000000814253 |
| Acer truncatum | chr3 | 6 | CH_acertr_962 | 4 | 4 | 0.000638672 |
| Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_634 | 4 | 4 | 0.000524182 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_708 | 7 | 29 | 0.000962193 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_309 | 10 | 60 | 0.000056525 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_445 | 8 | 69 | 0.000128323 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 6 | CH_atr_174 | 6 | 6 | 0.00000001687 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 6 | CH_atr_39 | 14 | 22 | 2.32821e-19 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 6 | CH_atr_446 | 4 | 4 | 0.000196063 |
| Amborella trichopoda | AmTr_v1.0_scaffold00114 | 6 | CH_atr_671 | 4 | 5 | 0.000972988 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1402 | 10 | 74 | 0.000111321 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1862 | 4 | 4 | 0.000567017 |
| Brassica napus | A01 | 6 | CH_bna_1457 | 4 | 4 | 0.000735849 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_444 | 4 | 4 | 0.000297618 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_87 | 8 | 9 | 0.0000000000307091 |
| Coffea canephora | chr5 | 6 | CH_ccan_448 | 4 | 11 | 0.0000783862 |
| Coffea canephora | chr2 | 6 | CH_ccan_641 | 5 | 52 | 0.000503573 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_445 | 5 | 6 | 0.0000368523 |
| Cucumis melo | chr07 | 6 | CH_cme_250 | 8 | 33 | 0.0000137453 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 6 | CH_cqu_1046 | 4 | 4 | 0.000903158 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_629 | 4 | 4 | 0.000672385 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_257 | 9 | 36 | 0.00000488469 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_183 | 9 | 20 | 0.0000000355225 |
| Davidia involucrata | GWHABJS00000021 | 6 | CH_din_138 | 8 | 9 | 0.0000000000406752 |
| Davidia involucrata | GWHABJS00000002 | 6 | CH_din_399 | 7 | 18 | 0.0000130593 |
| Davidia involucrata | GWHABJS00000007 | 6 | CH_din_701 | 4 | 4 | 0.000435452 |
| Durio zibethinus | NW_019167937.1 | 6 | CH_dzi_332 | 7 | 19 | 0.0000173535 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_59 | 27 | 46 | 1.59172e-32 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_807 | 11 | 40 | 0.000000782721 |
| Fragaria x ananassa | Fvb2-1 | 6 | CH_fan_1265 | 8 | 42 | 0.000857085 |
| Fragaria x ananassa | Fvb1-1 | 6 | CH_fan_339 | 8 | 16 | 0.000000117396 |
| Fragaria x ananassa | Fvb2-4 | 6 | CH_fan_932 | 8 | 36 | 0.000231599 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_258 | 12 | 56 | 0.0000000122753 |
| Gossypium hirsutum | A03 | 6 | CH_ghi_834 | 5 | 6 | 0.0000726287 |
| Gossypium hirsutum | D02 | 6 | CH_ghi_835 | 5 | 6 | 0.0000726287 |
| Gossypium raimondii | Chr12 | 6 | CH_gra_537 | 10 | 68 | 0.000208234 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_24 | 16 | 16 | 1.43204e-27 |
| Lupinus albus | Lalb_Chr14 | 6 | CH_lal_115 | 7 | 7 | 0.00000000142348 |
| Lonicera japonica | GWHAAZE00000094 | 6 | CH_lonja_1098 | 5 | 7 | 0.000370319 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_1113 | 7 | 22 | 0.00049594 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_339 | 7 | 7 | 0.00000000349316 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_38 | 23 | 28 | 4.64218e-34 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_59 | 21 | 31 | 1.08732e-27 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_522 | 6 | 9 | 0.0000102895 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_839 | 5 | 8 | 0.000567089 |
| Malus domestica | Chr08 | 6 | CH_mdo_1062 | 9 | 54 | 0.000205258 |
| Malus domestica | Chr07 | 6 | CH_mdo_186 | 9 | 12 | 0.0000000000124207 |
| Malus domestica | Chr05 | 6 | CH_mdo_428 | 6 | 6 | 0.0000000571496 |
| Malus domestica | Chr16 | 6 | CH_mdo_725 | 11 | 72 | 0.0000100153 |
| Malus domestica | Chr15 | 6 | CH_mdo_804 | 11 | 79 | 0.0000280838 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_226 | 6 | 8 | 0.000000400755 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_479 | 4 | 4 | 0.000208453 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_462 | 6 | 13 | 0.0000487862 |
| Petunia axillaris | Peaxi162Scf00016 | 6 | CH_pax_354 | 6 | 10 | 0.0000211608 |
| Prunus persica | Pp01 | 6 | CH_ppe_468 | 10 | 49 | 0.00000764423 |
| Papaver somniferum | NW_020618825.1 | 6 | CH_pso_568 | 5 | 5 | 0.000000832769 |
| Quercus lobata | 3 | 6 | CH_qlo_1496 | 11 | 75 | 0.000157522 |
| Quercus lobata | 7 | 6 | CH_qlo_1811 | 5 | 8 | 0.000798444 |
| Quercus lobata | CM012294 | 6 | CH_qlo_673 | 12 | 44 | 0.0000000126821 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_537 | 12 | 69 | 0.0000000529119 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_339 | 12 | 51 | 0.0000000126147 |
| Striga asiatica | scaffold90 | 6 | CH_sas_45 | 7 | 11 | 0.000000085828 |
| Salix brachista | GWHAAZH00000005 | 6 | CH_sbr_613 | 5 | 8 | 0.000381832 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_493 | 13 | 35 | 0.00000000000164788 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_22 | 22 | 40 | 7.56894e-28 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_368 | 6 | 7 | 0.000000632052 |
| Schrenkiella parvula | ch4-2 | 6 | CH_spa_176 | 5 | 5 | 0.00000665827 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_7 | 22 | 35 | 1.07523e-32 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_830 | 7 | 34 | 0.000632873 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_5 | 30 | 50 | 1.69071e-43 |
| Selenicereus undatus | Scaffold_33673 | 6 | CH_sun_132 | 7 | 20 | 0.00000741384 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_377 | 10 | 49 | 0.0000103913 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_381 | 6 | 10 | 0.0000319288 |
| Vanilla planifolia | CM028153.1 | 6 | CH_vpl_647 | 7 | 29 | 0.000450298 |
| Vitis vinifera | chr3 | 6 | CH_vvi_185 | 14 | 58 | 0.000000000837581 |
| Vitis vinifera | chr10 | 6 | CH_vvi_484 | 5 | 6 | 0.0000690156 |
| Zea mays | 7 | 6 | CH_zma_31 | 13 | 19 | 5.99157e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |