Functional clusters

Information

  • Type InterPro
  • Description DEAD/DEAH box helicase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 5 CH_bca_916 4 4 0.00000344661
Chara braunii BFEA01000290 5 CH_cbr_283 3 3 0.000227072
Ceratophyllum demersum 5 5 CH_cde_181 6 31 0.0000560071
Eucalyptus grandis Chr05 5 CH_egr_211 9 12 2.19032e-17
Helianthus annuus HanXRQChr11 5 CH_han_1201 3 3 0.000839219
Medicago truncatula chr7 5 CH_mtr_1371 3 3 0.000711138
Medicago truncatula chr8 5 CH_mtr_1372 3 4 0.000711138
Papaver somniferum NC_039358.1 5 CH_pso_848 4 7 0.000046169
Quercus lobata 5 5 CH_qlo_1203 6 44 0.0000500369
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1196 4 9 0.000194905
Rhododendron simsii chr11 5 CH_rsi_840 4 8 0.000266943
Sequoiadendron giganteum chr5 5 CH_sgi_1218 4 4 0.000000577072
Sequoiadendron giganteum chr1 5 CH_sgi_1219 4 4 0.000000577072
Tarenaya hassleriana NW_010966274.1 5 CH_tha_356 3 3 0.000722815
Brassica carinata ChrC03 6 CH_bca_916 4 4 0.00000344661
Chara braunii BFEA01000290 6 CH_cbr_283 3 3 0.000227072
Ceratophyllum demersum 5 6 CH_cde_181 6 31 0.0000560071
Eucalyptus grandis Chr05 6 CH_egr_211 9 12 2.19032e-17
Helianthus annuus HanXRQChr11 6 CH_han_1201 3 3 0.000839219
Medicago truncatula chr7 6 CH_mtr_1371 3 3 0.000711138
Medicago truncatula chr8 6 CH_mtr_1372 3 4 0.000711138
Papaver somniferum NC_039358.1 6 CH_pso_848 4 7 0.000046169
Quercus lobata 5 6 CH_qlo_1203 6 44 0.0000500369
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1196 4 9 0.000194905
Rhododendron simsii chr11 6 CH_rsi_840 4 8 0.000266943
Sequoiadendron giganteum chr5 6 CH_sgi_1218 4 4 0.000000577072
Sequoiadendron giganteum chr1 6 CH_sgi_1219 4 4 0.000000577072
Tarenaya hassleriana NW_010966274.1 6 CH_tha_356 3 3 0.000722815

Available child term results

Ontology identifier Description Number of clusters
IPR044756 DHX15, DEXH-box helicase domain 2
IPR044763 Ded1/Dbp1, DEAD-box helicase domain 14
IPR044764 DDX52/Rok1, DEAD-box helicase domain 2
IPR044765 DDX47/Rrp3, DEAD-box helicase domain 4
IPR044773 DDX18/Has1, DEAD-box helicase domain 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001