Functional clusters
Information
- Type InterPro
- Description Fatty acid hydroxylase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-6 | 5 | CH_aar_29 | 8 | 8 | 5.30412e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00067 | 5 | CH_atr_199 | 4 | 8 | 0.0000000751867 |
| Brassica carinata | ChrC01 | 5 | CH_bca_1159 | 3 | 3 | 0.0000246688 |
| Brassica carinata | ChrC09 | 5 | CH_bca_1160 | 3 | 3 | 0.0000246688 |
| Brassica napus | C03 | 5 | CH_bna_888 | 3 | 3 | 0.0000247577 |
| Brassica oleracea | C3 | 5 | CH_bol_172 | 4 | 4 | 0.00000000548572 |
| Brassica rapa | A03 | 5 | CH_bra_270 | 3 | 3 | 0.00000718825 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_185 | 3 | 4 | 0.0000662433 |
| Ceratophyllum demersum | 10 | 5 | CH_cde_59 | 4 | 4 | 0.000000013089 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_392 | 3 | 3 | 0.00000817004 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_355 | 3 | 3 | 0.0000077705 |
| Durio zibethinus | NW_019167971.1 | 5 | CH_dzi_20 | 10 | 13 | 1.27066e-24 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_419 | 3 | 4 | 0.00000676394 |
| Gossypium hirsutum | D02 | 5 | CH_ghi_402 | 4 | 4 | 0.0000000167246 |
| Gossypium hirsutum | A03 | 5 | CH_ghi_451 | 4 | 5 | 0.0000000835783 |
| Gossypium raimondii | Chr05 | 5 | CH_gra_233 | 4 | 5 | 0.0000000473008 |
| Helianthus annuus | HanXRQChr06 | 5 | CH_han_456 | 4 | 9 | 0.00000013037 |
| Medicago truncatula | chr6 | 5 | CH_mtr_860 | 3 | 4 | 0.0000179321 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_230 | 4 | 11 | 0.000000427942 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_477 | 3 | 8 | 0.000188564 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_526 | 3 | 8 | 0.000320924 |
| Rhododendron simsii | chr11 | 5 | CH_rsi_718 | 3 | 5 | 0.000083001 |
| Simmondsia chinensis | GWHAASQ00000011 | 5 | CH_sci_192 | 3 | 3 | 0.00000239236 |
| Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_372 | 4 | 8 | 0.000000356871 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_347 | 3 | 8 | 0.000504373 |
| Selenicereus undatus | Scaffold_33677 | 5 | CH_sun_49 | 4 | 4 | 0.00000000557722 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_196 | 5 | 7 | 0.00000000036539 |
| Vanilla planifolia | CM028157.1 | 5 | CH_vpl_264 | 3 | 3 | 0.00000668259 |
| Aethionema arabicum | LG-6 | 6 | CH_aar_29 | 8 | 8 | 5.30412e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00067 | 6 | CH_atr_199 | 4 | 8 | 0.0000000751867 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1159 | 3 | 3 | 0.0000246688 |
| Brassica carinata | ChrC09 | 6 | CH_bca_1160 | 3 | 3 | 0.0000246688 |
| Brassica napus | C03 | 6 | CH_bna_888 | 3 | 3 | 0.0000247577 |
| Brassica oleracea | C3 | 6 | CH_bol_172 | 4 | 4 | 0.00000000548572 |
| Brassica rapa | A03 | 6 | CH_bra_270 | 3 | 3 | 0.00000718825 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_185 | 3 | 4 | 0.0000662433 |
| Ceratophyllum demersum | 10 | 6 | CH_cde_59 | 4 | 4 | 0.000000013089 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_392 | 3 | 3 | 0.00000817004 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_355 | 3 | 3 | 0.0000077705 |
| Durio zibethinus | NW_019167971.1 | 6 | CH_dzi_20 | 10 | 13 | 1.27066e-24 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_419 | 3 | 4 | 0.00000676394 |
| Gossypium hirsutum | D02 | 6 | CH_ghi_402 | 4 | 4 | 0.0000000167246 |
| Gossypium hirsutum | A03 | 6 | CH_ghi_451 | 4 | 5 | 0.0000000835783 |
| Gossypium raimondii | Chr05 | 6 | CH_gra_233 | 4 | 5 | 0.0000000473008 |
| Helianthus annuus | HanXRQChr06 | 6 | CH_han_456 | 4 | 9 | 0.00000013037 |
| Medicago truncatula | chr6 | 6 | CH_mtr_860 | 3 | 4 | 0.0000179321 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_230 | 4 | 11 | 0.000000427942 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_477 | 3 | 8 | 0.000188564 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_526 | 3 | 8 | 0.000320924 |
| Rhododendron simsii | chr11 | 6 | CH_rsi_718 | 3 | 5 | 0.000083001 |
| Simmondsia chinensis | GWHAASQ00000011 | 6 | CH_sci_192 | 3 | 3 | 0.00000239236 |
| Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_372 | 4 | 8 | 0.000000356871 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_347 | 3 | 8 | 0.000504373 |
| Selenicereus undatus | Scaffold_33677 | 6 | CH_sun_49 | 4 | 4 | 0.00000000557722 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_196 | 5 | 7 | 0.00000000036539 |
| Vanilla planifolia | CM028157.1 | 6 | CH_vpl_264 | 3 | 3 | 0.00000668259 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |