Functional clusters

Information

  • Type InterPro
  • Description Mlo-related protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_34 5 12 0.000000000000246432
Acer truncatum chr3 5 CH_acertr_259 4 6 0.0000000482079
Acer truncatum chr13 5 CH_acertr_676 3 6 0.000121508
Aquilegia oxysepala CHR06 5 CH_aox_197 4 10 0.00000125581
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_456 4 5 0.0000000450335
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_805 3 3 0.0000154346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_806 3 3 0.0000154346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 5 CH_arhy_807 3 3 0.0000154346
Amborella trichopoda AmTr_v1.0_scaffold00044 5 CH_atr_65 6 14 0.000000000000366166
Brassica carinata ChrC06 5 CH_bca_1024 3 3 0.00000845895
Brassica carinata ChrB01 5 CH_bca_180 7 43 0.00000000000773632
Brassica napus A03 5 CH_bna_1065 3 5 0.000107551
Brassica napus C03 5 CH_bna_1066 3 5 0.000107551
Brassica napus C08 5 CH_bna_209 5 8 0.000000000116993
Brassica oleracea C8 5 CH_bol_126 5 11 0.000000000468768
Brassica oleracea C3 5 CH_bol_90 5 6 0.00000000000609836
Brassica rapa A03 5 CH_bra_313 3 4 0.0000254258
Corylus avellana 9 5 CH_cav_197 4 4 0.0000000202153
Corylus avellana 11 5 CH_cav_198 4 4 0.0000000202153
Corylus avellana 2 5 CH_cav_249 4 6 0.000000302797
Coffea canephora chr2 5 CH_ccan_418 3 26 0.0000712921
Citrus clementina scaffold_3 5 CH_ccl_665 3 8 0.00025667
Chenopodium quinoa C_Quinoa_Scaffold_4209 5 CH_cqu_515 3 3 0.00000596416
Davidia involucrata GWHABJS00000010 5 CH_din_503 3 6 0.000115428
Eucalyptus grandis Chr09 5 CH_egr_972 3 3 0.0000150297
Eutrema salsugineum scaffold_11 5 CH_esa_385 3 8 0.000221217
Fragaria vesca Fvb3 5 CH_fve_565 3 5 0.0000691775
Glycine max Gm12 5 CH_gma_612 4 22 0.00010856
Gossypium raimondii Chr10 5 CH_gra_365 3 3 0.00000991593
Helianthus annuus HanXRQChr01 5 CH_han_398 4 5 0.0000000311134
Helianthus annuus HanXRQChr09 5 CH_han_827 3 4 0.0000444211
Lonicera japonica GWHAAZE00000001 5 CH_lonja_655 3 3 0.0000176246
Lonicera japonica GWHAAZE00000004 5 CH_lonja_819 3 4 0.0000704567
Lactuca sativa Lsat_1_v8_lg_9 5 CH_lsa_630 3 4 0.0000712171
Magnolia biondii Chr03 5 CH_mbi_1175 3 9 0.000600064
Magnolia biondii Chr08 5 CH_mbi_500 4 10 0.000000765007
Magnolia biondii Chr17 5 CH_mbi_696 3 4 0.0000286327
Malus domestica Chr04 5 CH_mdo_1045 3 6 0.000157454
Malus domestica Chr06 5 CH_mdo_813 3 4 0.0000315154
Nelumbo nucifera chr2 5 CH_nnu_398 3 6 0.0000673863
Oryza sativa ssp. japonica chr05 5 CH_osa_328 3 3 0.00000152291
Punica granatum NC_045129.1 5 CH_pgr_350 3 3 0.000011233
Punica granatum NC_045128.1 5 CH_pgr_351 3 3 0.000011233
Physcomitrium patens Chr04 5 CH_ppa_102 3 5 0.00000928828
Prunus persica Pp06 5 CH_ppe_490 3 3 0.0000111018
Papaver somniferum NC_039366.1 5 CH_pso_1010 3 7 0.000190045
Papaver somniferum NC_039364.1 5 CH_pso_171 6 12 0.000000000000234643
Papaver somniferum NC_039358.1 5 CH_pso_937 3 6 0.000108629
Quercus lobata CM012294 5 CH_qlo_1168 3 3 0.0000285487
Quercus lobata 1 5 CH_qlo_1360 3 4 0.000114119
Quercus lobata 7 5 CH_qlo_373 6 8 0.000000000000449635
Quercus lobata 8 5 CH_qlo_374 6 8 0.000000000000449635
Quercus lobata 10 5 CH_qlo_395 6 9 0.00000000000134797
Rhododendron simsii chr10 5 CH_rsi_421 4 6 0.000000180582
Rhododendron simsii chr05 5 CH_rsi_422 4 6 0.000000180582
Rhododendron simsii chr01 5 CH_rsi_705 3 4 0.0000649255
Salvia bowleyana GWHASIU00000008 5 CH_sbo_389 3 3 0.00000412988
Salix brachista GWHAAZH00000011 5 CH_sbr_90 6 8 0.000000000000185117
Sequoiadendron giganteum chr9 5 CH_sgi_213 8 10 7.27689e-20
Sequoiadendron giganteum chr2 5 CH_sgi_81 12 20 1.52118e-29
Sequoiadendron giganteum chr7 5 CH_sgi_884 4 4 0.0000000109137
Solanum pennellii Spenn-ch06 5 CH_spe_461 3 4 0.0000114993
Selenicereus undatus Scaffold_33679 5 CH_sun_66 4 8 0.0000000169073
Trochodendron aralioides group1 5 CH_tar_443 3 3 0.0000219514
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_383 3 3 0.000011432
Trifolium pratense Tp57577_TGAC_v2_scaf_503 5 CH_tpr_384 3 3 0.000011432
Utricularia gibba unitig_22 5 CH_ugi_86 3 3 0.00000459468
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_336 3 3 0.00000880795
Vanilla planifolia CM028160.1 5 CH_vpl_305 3 3 0.0000188357
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_34 5 12 0.000000000000246432
Acer truncatum chr3 6 CH_acertr_259 4 6 0.0000000482079
Acer truncatum chr13 6 CH_acertr_676 3 6 0.000121508
Aquilegia oxysepala CHR06 6 CH_aox_197 4 10 0.00000125581
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_456 4 5 0.0000000450335
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_805 3 3 0.0000154346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_806 3 3 0.0000154346
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 6 CH_arhy_807 3 3 0.0000154346
Amborella trichopoda AmTr_v1.0_scaffold00044 6 CH_atr_65 6 14 0.000000000000366166
Brassica carinata ChrC06 6 CH_bca_1024 3 3 0.00000845895
Brassica carinata ChrB01 6 CH_bca_180 7 43 0.00000000000773632
Brassica napus A03 6 CH_bna_1065 3 5 0.000107551
Brassica napus C03 6 CH_bna_1066 3 5 0.000107551
Brassica napus C08 6 CH_bna_209 5 8 0.000000000116993
Brassica oleracea C8 6 CH_bol_126 5 11 0.000000000468768
Brassica oleracea C3 6 CH_bol_90 5 6 0.00000000000609836
Brassica rapa A03 6 CH_bra_313 3 4 0.0000254258
Corylus avellana 9 6 CH_cav_197 4 4 0.0000000202153
Corylus avellana 11 6 CH_cav_198 4 4 0.0000000202153
Corylus avellana 2 6 CH_cav_249 4 6 0.000000302797
Coffea canephora chr2 6 CH_ccan_418 3 26 0.0000712921
Citrus clementina scaffold_3 6 CH_ccl_665 3 8 0.00025667
Chenopodium quinoa C_Quinoa_Scaffold_4209 6 CH_cqu_515 3 3 0.00000596416
Davidia involucrata GWHABJS00000010 6 CH_din_503 3 6 0.000115428
Eucalyptus grandis Chr09 6 CH_egr_972 3 3 0.0000150297
Eutrema salsugineum scaffold_11 6 CH_esa_385 3 8 0.000221217
Fragaria vesca Fvb3 6 CH_fve_565 3 5 0.0000691775
Glycine max Gm12 6 CH_gma_612 4 22 0.00010856
Gossypium raimondii Chr10 6 CH_gra_365 3 3 0.00000991593
Helianthus annuus HanXRQChr01 6 CH_han_398 4 5 0.0000000311134
Helianthus annuus HanXRQChr09 6 CH_han_827 3 4 0.0000444211
Lonicera japonica GWHAAZE00000001 6 CH_lonja_655 3 3 0.0000176246
Lonicera japonica GWHAAZE00000004 6 CH_lonja_819 3 4 0.0000704567
Lactuca sativa Lsat_1_v8_lg_9 6 CH_lsa_630 3 4 0.0000712171
Magnolia biondii Chr03 6 CH_mbi_1175 3 9 0.000600064
Magnolia biondii Chr08 6 CH_mbi_500 4 10 0.000000765007
Magnolia biondii Chr17 6 CH_mbi_696 3 4 0.0000286327
Malus domestica Chr04 6 CH_mdo_1045 3 6 0.000157454
Malus domestica Chr06 6 CH_mdo_813 3 4 0.0000315154
Nelumbo nucifera chr2 6 CH_nnu_398 3 6 0.0000673863
Oryza sativa ssp. japonica chr05 6 CH_osa_328 3 3 0.00000152291
Punica granatum NC_045129.1 6 CH_pgr_350 3 3 0.000011233
Punica granatum NC_045128.1 6 CH_pgr_351 3 3 0.000011233
Physcomitrium patens Chr04 6 CH_ppa_102 3 5 0.00000928828
Prunus persica Pp06 6 CH_ppe_490 3 3 0.0000111018
Papaver somniferum NC_039366.1 6 CH_pso_1010 3 7 0.000190045
Papaver somniferum NC_039364.1 6 CH_pso_171 6 12 0.000000000000234643
Papaver somniferum NC_039358.1 6 CH_pso_937 3 6 0.000108629
Quercus lobata CM012294 6 CH_qlo_1168 3 3 0.0000285487
Quercus lobata 1 6 CH_qlo_1360 3 4 0.000114119
Quercus lobata 7 6 CH_qlo_373 6 8 0.000000000000449635
Quercus lobata 8 6 CH_qlo_374 6 8 0.000000000000449635
Quercus lobata 10 6 CH_qlo_395 6 9 0.00000000000134797
Rhododendron simsii chr10 6 CH_rsi_421 4 6 0.000000180582
Rhododendron simsii chr05 6 CH_rsi_422 4 6 0.000000180582
Rhododendron simsii chr01 6 CH_rsi_705 3 4 0.0000649255
Salvia bowleyana GWHASIU00000008 6 CH_sbo_389 3 3 0.00000412988
Salix brachista GWHAAZH00000011 6 CH_sbr_90 6 8 0.000000000000185117
Sequoiadendron giganteum chr9 6 CH_sgi_213 8 10 7.27689e-20
Sequoiadendron giganteum chr2 6 CH_sgi_81 12 20 1.52118e-29
Sequoiadendron giganteum chr7 6 CH_sgi_884 4 4 0.0000000109137
Solanum pennellii Spenn-ch06 6 CH_spe_461 3 4 0.0000114993
Selenicereus undatus Scaffold_33679 6 CH_sun_66 4 8 0.0000000169073
Trochodendron aralioides group1 6 CH_tar_443 3 3 0.0000219514
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_383 3 3 0.000011432
Trifolium pratense Tp57577_TGAC_v2_scaf_503 6 CH_tpr_384 3 3 0.000011432
Utricularia gibba unitig_22 6 CH_ugi_86 3 3 0.00000459468
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_336 3 3 0.00000880795
Vanilla planifolia CM028160.1 6 CH_vpl_305 3 3 0.0000188357

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001