Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.betaines.glycinebetaine biosynthesis.betaine-aldehyde dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 1 CH_amhyb_159 2 2 0.0000841751
Beta vulgaris Chr5_EL10_PGA_scaffold2 1 CH_bvu_238 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_3422 1 CH_cqu_382 2 2 0.000142146
Durio zibethinus NW_019167838.1 1 CH_dzi_240 2 2 0.000139047
Malus domestica Chr14 1 CH_mdo_580 2 2 0.000227527
Malus domestica Chr06 1 CH_mdo_581 2 2 0.000227527
Punica granatum NC_045133.1 1 CH_pgr_292 2 2 0.000225107
Prunus persica Pp05 1 CH_ppe_423 2 2 0.000223789
Rhododendron simsii chr08 1 CH_rsi_415 2 3 0.000193586
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 2 CH_amhyb_159 2 2 0.0000841751
Beta vulgaris Chr5_EL10_PGA_scaffold2 2 CH_bvu_238 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_3422 2 CH_cqu_382 2 2 0.000142146
Durio zibethinus NW_019167838.1 2 CH_dzi_240 2 2 0.000139047
Malus domestica Chr14 2 CH_mdo_580 2 2 0.000227527
Malus domestica Chr06 2 CH_mdo_581 2 2 0.000227527
Punica granatum NC_045133.1 2 CH_pgr_292 2 2 0.000225107
Prunus persica Pp05 2 CH_ppe_423 2 2 0.000223789
Rhododendron simsii chr08 2 CH_rsi_415 2 3 0.000193586

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001