Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.anthocyanidins.dihydroflavonol 4-reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 1 CH_arhy_510 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_511 2 2 0.00017963
Camellia sinensis var. sinensis Chr4 1 CH_camsi_166 4 13 0.00000000103376
Carya illinoinensis Chr07 1 CH_cil_360 2 2 0.0000619828
Corchorus olitorius AWUE01019228.1 1 CH_col_79 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_3472 1 CH_cqu_582 2 4 0.000852811
Durio zibethinus NW_019167949.1 1 CH_dzi_372 2 4 0.000834215
Fragaria x ananassa Fvb2-3 1 CH_fan_427 2 2 0.000185036
Fragaria x ananassa Fvb2-1 1 CH_fan_428 2 2 0.000185036
Lotus japonicus chr5 1 CH_lja_21 5 5 0.00000000000000117684
Medicago truncatula chr1 1 CH_mtr_529 2 2 0.0000410863
Punica granatum NC_045133.1 1 CH_pgr_213 2 2 0.0000750356
Phaseolus vulgaris Chr01 1 CH_pvu_360 2 2 0.000220418
Quercus lobata CM012294 1 CH_qlo_675 2 2 0.0000516289
Rhododendron simsii chr06 1 CH_rsi_160 3 3 0.0000000249861
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_251 2 2 0.0000929238
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 2 CH_arhy_510 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_511 2 2 0.00017963
Camellia sinensis var. sinensis Chr4 2 CH_camsi_166 4 13 0.00000000103376
Carya illinoinensis Chr07 2 CH_cil_360 2 2 0.0000619828
Corchorus olitorius AWUE01019228.1 2 CH_col_79 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_3472 2 CH_cqu_582 2 4 0.000852811
Durio zibethinus NW_019167949.1 2 CH_dzi_372 2 4 0.000834215
Fragaria x ananassa Fvb2-3 2 CH_fan_427 2 2 0.000185036
Fragaria x ananassa Fvb2-1 2 CH_fan_428 2 2 0.000185036
Lotus japonicus chr5 2 CH_lja_21 5 5 0.00000000000000117684
Punica granatum NC_045133.1 2 CH_pgr_213 2 2 0.0000750356
Phaseolus vulgaris Chr01 2 CH_pvu_360 2 2 0.000220418
Quercus lobata CM012294 2 CH_qlo_675 2 2 0.0000516289
Rhododendron simsii chr06 2 CH_rsi_160 3 3 0.0000000249861
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_251 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001