Functional clusters
Information
- Type MapMan
- Description Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Selaginella moellendorffii | scaffold_78 | 1 | CH_smo_82 | 3 | 5 | 0.0000731618 |
| Selaginella moellendorffii | scaffold_78 | 2 | CH_smo_82 | 3 | 5 | 0.0000731618 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 9.1.6.2.1.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.carotenoid hydroxylase activities.carotenoid beta-ring hydroxylase (BCH) | 8 |
| 9.1.6.2.4 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.neoxanthin synthase (ABA4) | 5 |
| 9.1.6.2.5 | Secondary metabolism.terpenoids.carotenoid biosynthesis.xanthophylls.neoxanthin biosynthesis cofactor (NXD1) | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |