Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-d-xylulose 5-phosphate import.D-xylulose kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102833_HRSCAF_103052 1 CH_ama_55 2 2 0.0000862218
Beta vulgaris Chr1_EL10_PGA_scaffold3 1 CH_bvu_181 2 2 0.0000827917
Coffea canephora chr10 1 CH_ccan_162 2 4 0.0000127767
Chenopodium quinoa C_Quinoa_Scaffold_1319 1 CH_cqu_433 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2733 1 CH_cqu_591 2 3 0.000852831
Fragaria vesca Fvb5 1 CH_fve_379 2 4 0.00035344
Physcomitrium patens Chr04 1 CH_ppa_168 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_212 3 4 0.00000000953543
Solanum lycopersicum SL4.0ch04 1 CH_sly_332 2 2 0.0000586941
Selenicereus undatus Scaffold_19641 1 CH_sun_126 2 2 0.0000726639
Avicennia marina ScioBoG_102833_HRSCAF_103052 2 CH_ama_55 2 2 0.0000862218
Beta vulgaris Chr1_EL10_PGA_scaffold3 2 CH_bvu_181 2 2 0.0000827917
Coffea canephora chr10 2 CH_ccan_162 2 4 0.0000127767
Chenopodium quinoa C_Quinoa_Scaffold_1319 2 CH_cqu_433 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2733 2 CH_cqu_591 2 3 0.000852831
Fragaria vesca Fvb5 2 CH_fve_379 2 4 0.00035344
Physcomitrium patens Chr04 2 CH_ppa_168 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_212 3 4 0.00000000953543
Solanum lycopersicum SL4.0ch04 2 CH_sly_332 2 2 0.0000586941
Selenicereus undatus Scaffold_19641 2 CH_sun_126 2 2 0.0000726639

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001