Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_1085 2 4 0.000769513
Capsicum annuum PGAv.1.6.scaffold694 1 CH_can_292 2 2 0.0000826105
Helianthus annuus HanXRQChr09 1 CH_han_524 2 2 0.000115929
Brassica carinata ChrC05 2 CH_bca_1085 2 4 0.000769513
Capsicum annuum PGAv.1.6.scaffold694 2 CH_can_292 2 2 0.0000826105
Eucalyptus grandis Chr01 2 CH_egr_795 2 2 0.000175582
Helianthus annuus HanXRQChr09 2 CH_han_524 2 2 0.000115929

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001