Functional clusters

Information

  • Type MapMan
  • Description Polyamine metabolism.cadaverine biosynthesis.lysine decarboxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 1 CH_amhyb_165 2 2 0.0000841751
Beta vulgaris Chr2_EL10_PGA_scaffold6 1 CH_bvu_23 5 5 0.0000000000000197381
Cannabis sativa NC_044372.1 1 CH_cansat_333 2 4 0.000393959
Coffea canephora chr0 1 CH_ccan_387 2 22 0.000983766
Citrullus lanatus CG_Chr06 1 CH_cla_159 2 3 0.000266123
Carica papaya supercontig_123 1 CH_cpa_11 4 4 0.00000000000257786
Chenopodium quinoa C_Quinoa_Scaffold_2487 1 CH_cqu_29 6 10 3.15954e-17
Helianthus annuus HanXRQChr03 1 CH_han_299 3 16 0.00000125406
Manihot esculenta Chromosome03 1 CH_mes_307 2 2 0.0000610631
Medicago truncatula chr4 1 CH_mtr_202 3 3 0.00000000253218
Petunia axillaris Peaxi162Scf00320 1 CH_pax_25 4 4 0.00000000000104487
Phaseolus vulgaris Chr11 1 CH_pvu_116 3 4 0.0000000323894
Striga asiatica scaffold21 1 CH_sas_71 2 2 0.0000625371
Sechium edule LG12 1 CH_sed_73 3 3 0.0000000305391
Solanum lycopersicum SL4.0ch07 1 CH_sly_41 6 14 3.29416e-16
Solanum pennellii Spenn-ch07 1 CH_spe_449 2 2 0.000266874
Trochodendron aralioides group3 1 CH_tar_287 2 2 0.0000600366
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_400 2 3 0.000681233
Utricularia gibba unitig_578 1 CH_ugi_186 2 2 0.0000734592
Vigna mungo CM024076.1 1 CH_vmu_235 2 2 0.0000646141
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 2 CH_amhyb_165 2 2 0.0000841751
Beta vulgaris Chr2_EL10_PGA_scaffold6 2 CH_bvu_23 5 5 0.0000000000000197381
Cannabis sativa NC_044372.1 2 CH_cansat_333 2 4 0.000393959
Coffea canephora chr0 2 CH_ccan_387 2 22 0.000983766
Citrullus lanatus CG_Chr06 2 CH_cla_159 2 3 0.000266123
Carica papaya supercontig_123 2 CH_cpa_11 4 4 0.00000000000257786
Chenopodium quinoa C_Quinoa_Scaffold_2487 2 CH_cqu_29 6 10 3.15954e-17
Helianthus annuus HanXRQChr03 2 CH_han_299 3 16 0.00000125406
Manihot esculenta Chromosome03 2 CH_mes_307 2 2 0.0000610631
Petunia axillaris Peaxi162Scf00320 2 CH_pax_25 4 4 0.00000000000104487
Phaseolus vulgaris Chr11 2 CH_pvu_116 3 4 0.0000000323894
Striga asiatica scaffold21 2 CH_sas_71 2 2 0.0000625371
Sechium edule LG12 2 CH_sed_73 3 3 0.0000000305391
Solanum lycopersicum SL4.0ch07 2 CH_sly_41 6 14 3.29416e-16
Solanum pennellii Spenn-ch07 2 CH_spe_449 2 2 0.000266874
Trochodendron aralioides group3 2 CH_tar_287 2 2 0.0000600366
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_400 2 3 0.000681233
Utricularia gibba unitig_578 2 CH_ugi_186 2 2 0.0000734592
Vigna mungo CM024076.1 2 CH_vmu_235 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001