Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrahydrofolate metabolism.gamma-glutamyl hydrolase (GGH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group5 1 CH_ach_215 2 3 0.000488869
Arabidopsis lyrata scaffold_2 1 CH_aly_79 3 3 0.00000000653509
Aquilegia oxysepala CHR04 1 CH_aox_272 2 4 0.000481155
Arabidopsis thaliana Chr1 1 CH_ath_82 3 4 0.00000000492466
Brassica napus A07 1 CH_bna_546 2 2 0.000185515
Brassica rapa A07 1 CH_bra_303 2 3 0.000386368
Cicer arietinum L. Ca_LG1_v3 1 CH_car_182 2 2 0.0000778301
Citrus clementina scaffold_3 1 CH_ccl_72 5 13 0.000000000109983
Cardamine hirsuta Chr2 1 CH_chi_91 3 3 0.0000000071667
Carya illinoinensis Chr11 1 CH_cil_217 3 6 0.000000115249
Cucumis melo chr07 1 CH_cme_207 2 2 0.0000667111
Capsella rubella scaffold_2 1 CH_cru_108 3 4 0.0000000320752
Cucumis sativus L. chr4 1 CH_csa_83 3 3 0.0000000104528
Eucalyptus grandis Chr06 1 CH_egr_233 4 6 0.00000000000902202
Erythranthe guttata scaffold_8 1 CH_egut_86 4 8 0.000000000405302
Eutrema salsugineum scaffold_9 1 CH_esa_197 2 2 0.0000761499
Glycine max Gm13 1 CH_gma_330 2 2 0.0000379557
Gossypium raimondii Chr02 1 CH_gra_404 2 5 0.000536064
Malus domestica Chr03 1 CH_mdo_506 2 2 0.000113763
Medicago truncatula chr2 1 CH_mtr_110 4 4 0.000000000000208085
Phaseolus vulgaris Chr05 1 CH_pvu_313 2 2 0.0000734727
Quercus lobata 8 1 CH_qlo_700 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_121 5 35 0.0000000000061749
Salvia bowleyana GWHASIU00000005 1 CH_sbo_350 2 2 0.000136494
Sequoiadendron giganteum chr11 1 CH_sgi_1154 2 2 0.000146145
Solanum lycopersicum SL4.0ch07 1 CH_sly_434 2 2 0.000176082
Solanum pennellii Spenn-ch07 1 CH_spe_381 2 2 0.000133437
Solanum tuberosum ST4.03ch07 1 CH_stu_481 2 2 0.000153736
Theobroma cacao Chromosome_7 1 CH_tca_117 3 3 0.00000000804614
Vigna mungo CM024079.1 1 CH_vmu_234 2 2 0.0000646141
Actinidia chinensis Lachesis_group5 2 CH_ach_215 2 3 0.000488869
Arabidopsis lyrata scaffold_2 2 CH_aly_79 3 3 0.00000000653509
Aquilegia oxysepala CHR04 2 CH_aox_272 2 4 0.000481155
Arabidopsis thaliana Chr1 2 CH_ath_82 3 4 0.00000000492466
Brassica rapa A07 2 CH_bra_303 2 3 0.000386368
Cicer arietinum L. Ca_LG1_v3 2 CH_car_182 2 2 0.0000778301
Citrus clementina scaffold_3 2 CH_ccl_72 5 13 0.000000000109983
Cardamine hirsuta Chr2 2 CH_chi_91 3 3 0.0000000071667
Carya illinoinensis Chr11 2 CH_cil_217 3 6 0.000000115249
Cucumis melo chr07 2 CH_cme_207 2 2 0.0000667111
Capsella rubella scaffold_2 2 CH_cru_108 3 4 0.0000000320752
Cucumis sativus L. chr4 2 CH_csa_83 3 3 0.0000000104528
Eucalyptus grandis Chr06 2 CH_egr_233 4 6 0.00000000000902202
Erythranthe guttata scaffold_8 2 CH_egut_86 4 8 0.000000000405302
Eutrema salsugineum scaffold_9 2 CH_esa_197 2 2 0.0000761499
Gossypium hirsutum A01 2 CH_ghi_596 2 3 0.000240309
Glycine max Gm13 2 CH_gma_330 2 2 0.0000379557
Gossypium raimondii Chr02 2 CH_gra_404 2 5 0.000536064
Malus domestica Chr03 2 CH_mdo_506 2 2 0.000113763
Phaseolus vulgaris Chr05 2 CH_pvu_313 2 2 0.0000734727
Quercus lobata 8 2 CH_qlo_700 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_121 5 35 0.0000000000061749
Salvia bowleyana GWHASIU00000005 2 CH_sbo_350 2 2 0.000136494
Sequoiadendron giganteum chr11 2 CH_sgi_1154 2 2 0.000146145
Solanum lycopersicum SL4.0ch07 2 CH_sly_434 2 2 0.000176082
Solanum pennellii Spenn-ch07 2 CH_spe_381 2 2 0.000133437
Solanum tuberosum ST4.03ch07 2 CH_stu_481 2 2 0.000153736
Theobroma cacao Chromosome_7 2 CH_tca_117 3 3 0.00000000804614
Vigna mungo CM024079.1 2 CH_vmu_234 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001