Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.coenzyme A biosynthesis.pantothenate biosynthesis.ketopantoate hydroxymethyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_265 3 7 0.000000470496
Amborella trichopoda AmTr_v1.0_scaffold00061 1 CH_atr_68 3 3 0.00000000946662
Capsicum annuum PGAv.1.6.scaffold439 1 CH_can_291 2 2 0.0000826105
Cicer arietinum L. Ca_LG1_v3 1 CH_car_176 2 2 0.0000778301
Fragaria x ananassa Fvb7-2 1 CH_fan_636 2 2 0.000832663
Fragaria x ananassa Fvb7-1 1 CH_fan_637 2 2 0.000832663
Fragaria x ananassa Fvb7-1 1 CH_fan_638 2 2 0.000832663
Fragaria vesca Fvb7 1 CH_fve_282 2 2 0.0000589102
Medicago truncatula chr4 1 CH_mtr_154 4 8 0.0000000000728188
Oryza sativa ssp. japonica chr01 1 CH_osa_221 2 2 0.0000528123
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_560 2 3 0.000119593
Sequoiadendron giganteum chr7 1 CH_sgi_1143 2 2 0.000146145
Sapria himalayana scaffold18_10761044 1 CH_shi_186 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_328 2 2 0.000227092
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_265 3 7 0.000000470496
Amborella trichopoda AmTr_v1.0_scaffold00061 2 CH_atr_68 3 3 0.00000000946662
Capsicum annuum PGAv.1.6.scaffold439 2 CH_can_291 2 2 0.0000826105
Cicer arietinum L. Ca_LG1_v3 2 CH_car_176 2 2 0.0000778301
Eucalyptus grandis Chr02 2 CH_egr_380 3 4 0.0000000205528
Fragaria x ananassa Fvb7-2 2 CH_fan_636 2 2 0.000832663
Fragaria x ananassa Fvb7-1 2 CH_fan_637 2 2 0.000832663
Fragaria x ananassa Fvb7-1 2 CH_fan_638 2 2 0.000832663
Fragaria vesca Fvb7 2 CH_fve_282 2 2 0.0000589102
Oryza sativa ssp. japonica chr01 2 CH_osa_221 2 2 0.0000528123
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_560 2 3 0.000119593
Sequoiadendron giganteum chr7 2 CH_sgi_1143 2 2 0.000146145
Sapria himalayana scaffold18_10761044 2 CH_shi_186 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_328 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001