Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl homocysteine hydrolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102837_HRSCAF_103074 1 CH_ama_108 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold1155 1 CH_can_417 2 2 0.000495663
Eucalyptus grandis Chr08 1 CH_egr_162 5 6 0.0000000000000110895
Erythranthe guttata scaffold_7 1 CH_egut_385 2 2 0.000218444
Physcomitrium patens Chr19 1 CH_ppa_27 4 42 0.0000000771616
Sequoiadendron giganteum chr1 1 CH_sgi_643 3 13 0.00000407071
Solanum lycopersicum SL4.0ch09 1 CH_sly_433 2 2 0.000176082
Solanum pennellii Spenn-ch09 1 CH_spe_380 2 2 0.000133437
Avicennia marina ScioBoG_102837_HRSCAF_103074 2 CH_ama_108 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold1155 2 CH_can_417 2 2 0.000495663
Eucalyptus grandis Chr08 2 CH_egr_162 5 6 0.0000000000000110895
Erythranthe guttata scaffold_7 2 CH_egut_385 2 2 0.000218444
Physcomitrium patens Chr19 2 CH_ppa_27 4 42 0.0000000771616
Sequoiadendron giganteum chr1 2 CH_sgi_643 3 13 0.00000407071
Solanum lycopersicum SL4.0ch09 2 CH_sly_433 2 2 0.000176082
Solanum pennellii Spenn-ch09 2 CH_spe_380 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001