Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.thiamine pyrophosphate biosynthesis.thiazole biosynthesis.hydoxyethylthiazole kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold305 1 CH_can_290 2 2 0.0000826105
Erythranthe guttata scaffold_7 1 CH_egut_348 2 3 0.000218436
Lonicera japonica GWHAAZE00000093 1 CH_lonja_445 2 3 0.000179657
Pisum sativum chr4LG4 1 CH_psa_431 2 3 0.000938886
Rhododendron simsii chr09 1 CH_rsi_232 3 12 0.00000103041
Solanum tuberosum ST4.03ch05 1 CH_stu_394 2 2 0.0000512453
Capsicum annuum PGAv.1.6.scaffold305 2 CH_can_290 2 2 0.0000826105
Erythranthe guttata scaffold_7 2 CH_egut_348 2 3 0.000218436
Lonicera japonica GWHAAZE00000093 2 CH_lonja_445 2 3 0.000179657
Pisum sativum chr4LG4 2 CH_psa_431 2 3 0.000938886
Rhododendron simsii chr09 2 CH_rsi_232 3 12 0.00000103041
Solanum tuberosum ST4.03ch05 2 CH_stu_394 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001