Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.phylloquinone biosynthesis.multifunctional phylloquinone biosynthesis protein (PHYLLO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr10 1 CH_camsi_560 2 2 0.0000458547
Capsella rubella scaffold_2 1 CH_cru_286 2 2 0.0000731154
Davidia involucrata GWHABJS00000008 1 CH_din_406 2 4 0.00030006
Pisum sativum chr4LG4 1 CH_psa_382 2 2 0.000521635
Quercus lobata 3 1 CH_qlo_320 3 3 0.00000000399842
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_501 2 2 0.0000398653
Vigna mungo CM024079.1 1 CH_vmu_232 2 2 0.0000646141
Vanilla planifolia CM028159.1 1 CH_vpl_116 3 24 0.0000165626
Vitis vinifera chr1 1 CH_vvi_295 2 2 0.000076063
Zea mays 5 1 CH_zma_164 2 2 0.0000511313
Camellia sinensis var. sinensis Chr10 2 CH_camsi_560 2 2 0.0000458547
Capsella rubella scaffold_2 2 CH_cru_286 2 2 0.0000731154
Davidia involucrata GWHABJS00000008 2 CH_din_406 2 4 0.00030006
Pisum sativum chr4LG4 2 CH_psa_382 2 2 0.000521635
Quercus lobata 3 2 CH_qlo_320 3 3 0.00000000399842
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_501 2 2 0.0000398653
Vigna mungo CM024079.1 2 CH_vmu_232 2 2 0.0000646141
Vanilla planifolia CM028159.1 2 CH_vpl_116 3 24 0.0000165626
Vitis vinifera chr1 2 CH_vvi_295 2 2 0.000076063
Zea mays 5 2 CH_zma_164 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001