Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.Mg-protoporphyrin IX monomethylester cyclase complex.scaffolding component LCAA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 1 CH_arhy_555 2 3 0.000269438
Brassica carinata ChrB01 1 CH_bca_238 4 66 0.000000105477
Manihot esculenta Chromosome15 1 CH_mes_204 3 6 0.00000111839
Petunia axillaris Peaxi162Scf00372 1 CH_pax_254 2 2 0.000211067
Physcomitrium patens Chr04 1 CH_ppa_244 2 2 0.000367636
Quercus lobata 1 1 CH_qlo_866 2 4 0.000309757
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 2 CH_arhy_555 2 3 0.000269438
Brassica carinata ChrB01 2 CH_bca_238 4 66 0.000000105477
Manihot esculenta Chromosome15 2 CH_mes_204 3 6 0.00000111839
Petunia axillaris Peaxi162Scf00372 2 CH_pax_254 2 2 0.000211067
Physcomitrium patens Chr04 2 CH_ppa_244 2 2 0.000367636
Quercus lobata 1 2 CH_qlo_866 2 4 0.000309757

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001