Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional GTP cyclohydrolase II (RibA) and DHBP synthase (RibB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr10 1 CH_cla_180 2 2 0.000266134
Cucumis sativus L. chr4 1 CH_csa_279 2 2 0.000250428
Helianthus annuus HanXRQChr10 1 CH_han_531 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_413 2 2 0.000154202
Sechium edule LG13 1 CH_sed_324 2 3 0.000642039
Sequoiadendron giganteum chr5 1 CH_sgi_965 2 2 0.0000487151
Citrullus lanatus CG_Chr10 2 CH_cla_180 2 2 0.000266134
Cucumis sativus L. chr4 2 CH_csa_279 2 2 0.000250428
Helianthus annuus HanXRQChr10 2 CH_han_531 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_413 2 2 0.000154202
Sechium edule LG13 2 CH_sed_324 2 3 0.000642039
Sequoiadendron giganteum chr5 2 CH_sgi_965 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001