Functional clusters

Information

  • Type MapMan
  • Description Nucleotide metabolism.pyrimidines.catabolism.pseudouridine catabolic pathway.pseudouridine kinase (PUKI)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium raimondii Chr12 1 CH_gra_308 2 2 0.000160832
Lonicera japonica GWHAAZE00000009 1 CH_lonja_383 2 2 0.0000598874
Populus trichocarpa Chr04 1 CH_ptr_532 2 6 0.000866902
Simmondsia chinensis GWHAASQ00000014 1 CH_sci_99 3 13 0.00000310874
Eucalyptus grandis Chr07 2 CH_egr_476 4 56 0.00000022059
Gossypium hirsutum D04 2 CH_ghi_493 2 2 0.0000801047
Gossypium raimondii Chr12 2 CH_gra_308 2 2 0.000160832
Lonicera japonica GWHAAZE00000009 2 CH_lonja_383 2 2 0.0000598874
Populus trichocarpa Chr04 2 CH_ptr_532 2 6 0.000866902
Simmondsia chinensis GWHAASQ00000014 2 CH_sci_99 3 13 0.00000310874

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001