Functional clusters
Information
- Type MapMan
- Description Nucleotide metabolism.pyrimidines.catabolism.dihydopyrimidine aminohydrolase (PYD2)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Cicer arietinum L. | Ca_LG2_v3 | 1 | CH_car_260 | 2 | 4 | 0.000466944 |
Carpinus fangiana | Cfa04 | 1 | CH_cfa_245 | 2 | 2 | 0.0000757346 |
Carica papaya | supercontig_34 | 1 | CH_cpa_237 | 2 | 2 | 0.0000950661 |
Hydrangea macrophylla | Hma1.2p1_0460F.1 | 1 | CH_hma_287 | 2 | 2 | 0.000111086 |
Lonicera japonica | GWHAAZE00000002 | 1 | CH_lonja_401 | 2 | 2 | 0.0000598874 |
Punica granatum | NC_045132.1 | 1 | CH_pgr_226 | 2 | 2 | 0.0000750356 |
Prunus persica | Pp04 | 1 | CH_ppe_353 | 2 | 2 | 0.0000745962 |
Rhododendron simsii | chr13 | 1 | CH_rsi_299 | 3 | 28 | 0.0000204471 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 1 | CH_tpr_61 | 3 | 3 | 0.00000000859546 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_274 | 2 | 2 | 0.0000929238 |
Cicer arietinum L. | Ca_LG2_v3 | 2 | CH_car_260 | 2 | 4 | 0.000466944 |
Carpinus fangiana | Cfa04 | 2 | CH_cfa_245 | 2 | 2 | 0.0000757346 |
Carica papaya | supercontig_34 | 2 | CH_cpa_237 | 2 | 2 | 0.0000950661 |
Hydrangea macrophylla | Hma1.2p1_0460F.1 | 2 | CH_hma_287 | 2 | 2 | 0.000111086 |
Lotus japonicus | Contig00564 | 2 | CH_lja_304 | 2 | 3 | 0.000214516 |
Lonicera japonica | GWHAAZE00000002 | 2 | CH_lonja_401 | 2 | 2 | 0.0000598874 |
Punica granatum | NC_045132.1 | 2 | CH_pgr_226 | 2 | 2 | 0.0000750356 |
Prunus persica | Pp04 | 2 | CH_ppe_353 | 2 | 2 | 0.0000745962 |
Rhododendron simsii | chr13 | 2 | CH_rsi_299 | 3 | 28 | 0.0000204471 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 2 | CH_tpr_61 | 3 | 3 | 0.00000000859546 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_274 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |