Functional clusters
Information
- Type MapMan
- Description Nucleotide metabolism.purines.extracellular ATP.nucleoside hydrolase (NSH3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_6 | 1 | CH_aly_246 | 2 | 2 | 0.0000660044 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_113 | 3 | 7 | 0.0000000430889 |
| Ceratophyllum demersum | 3 | 1 | CH_cde_119 | 2 | 2 | 0.0000789796 |
| Cardamine hirsuta | Chr6 | 1 | CH_chi_260 | 2 | 2 | 0.0000691204 |
| Capsella rubella | scaffold_6 | 1 | CH_cru_282 | 2 | 2 | 0.0000731154 |
| Fragaria x ananassa | Fvb4-2 | 1 | CH_fan_598 | 2 | 2 | 0.00066613 |
| Fragaria x ananassa | Fvb4-1 | 1 | CH_fan_599 | 2 | 2 | 0.00066613 |
| Fragaria vesca | Fvb4 | 1 | CH_fve_383 | 2 | 4 | 0.00035344 |
| Glycine max | Gm13 | 1 | CH_gma_528 | 2 | 2 | 0.000379557 |
| Glycine max | Gm07 | 1 | CH_gma_529 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr11 | 1 | CH_gra_426 | 2 | 2 | 0.000536107 |
| Helianthus annuus | HanXRQChr03 | 1 | CH_han_105 | 4 | 5 | 0.0000000000129836 |
| Lonicera japonica | GWHAAZE00000003 | 1 | CH_lonja_618 | 2 | 2 | 0.000598874 |
| Manihot esculenta | Chromosome15 | 1 | CH_mes_379 | 2 | 2 | 0.000183189 |
| Nicotiana tabacum | Nitab4.5_0000059 | 1 | CH_nta_49 | 3 | 4 | 0.000000722346 |
| Olea europaea | chr2 | 1 | CH_oeu_15 | 4 | 4 | 0.000000000000456315 |
| Petunia axillaris | Peaxi162Scf00095 | 1 | CH_pax_94 | 3 | 7 | 0.000000259843 |
| Populus trichocarpa | Chr08 | 1 | CH_ptr_319 | 2 | 2 | 0.0000578001 |
| Quercus lobata | 6 | 1 | CH_qlo_191 | 4 | 5 | 0.00000000000206439 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_612 | 2 | 2 | 0.000119596 |
| Salvia bowleyana | GWHASIU00000007 | 1 | CH_sbo_290 | 2 | 2 | 0.000045498 |
| Salix brachista | GWHAAZH00000008 | 1 | CH_sbr_267 | 2 | 3 | 0.000189036 |
| Simmondsia chinensis | GWHAASQ00000025 | 1 | CH_sci_204 | 2 | 3 | 0.000255417 |
| Sequoiadendron giganteum | chr11 | 1 | CH_sgi_1042 | 2 | 3 | 0.000146142 |
| Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_57 | 5 | 15 | 0.000000000000267265 |
| Schrenkiella parvula | ch6-6 | 1 | CH_spa_181 | 2 | 2 | 0.000078734 |
| Solanum pennellii | Spenn-ch01 | 1 | CH_spe_131 | 3 | 4 | 0.0000000474804 |
| Solanum tuberosum | ST4.03ch01 | 1 | CH_stu_629 | 2 | 4 | 0.000922336 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_591 | 1 | CH_tpr_96 | 3 | 4 | 0.000000137518 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_87 | 3 | 3 | 0.0000000129529 |
| Arabidopsis lyrata | scaffold_6 | 2 | CH_aly_246 | 2 | 2 | 0.0000660044 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_113 | 3 | 7 | 0.0000000430889 |
| Ceratophyllum demersum | 3 | 2 | CH_cde_119 | 2 | 2 | 0.0000789796 |
| Cardamine hirsuta | Chr6 | 2 | CH_chi_260 | 2 | 2 | 0.0000691204 |
| Capsella rubella | scaffold_6 | 2 | CH_cru_282 | 2 | 2 | 0.0000731154 |
| Fragaria x ananassa | Fvb4-2 | 2 | CH_fan_598 | 2 | 2 | 0.00066613 |
| Fragaria x ananassa | Fvb4-1 | 2 | CH_fan_599 | 2 | 2 | 0.00066613 |
| Fragaria vesca | Fvb4 | 2 | CH_fve_383 | 2 | 4 | 0.00035344 |
| Glycine max | Gm13 | 2 | CH_gma_528 | 2 | 2 | 0.000379557 |
| Glycine max | Gm07 | 2 | CH_gma_529 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr11 | 2 | CH_gra_426 | 2 | 2 | 0.000536107 |
| Helianthus annuus | HanXRQChr03 | 2 | CH_han_105 | 4 | 5 | 0.0000000000129836 |
| Lotus japonicus | chr4 | 2 | CH_lja_398 | 2 | 3 | 0.000643531 |
| Lonicera japonica | GWHAAZE00000003 | 2 | CH_lonja_618 | 2 | 2 | 0.000598874 |
| Manihot esculenta | Chromosome15 | 2 | CH_mes_379 | 2 | 2 | 0.000183189 |
| Nicotiana tabacum | Nitab4.5_0000059 | 2 | CH_nta_49 | 3 | 4 | 0.000000722346 |
| Olea europaea | chr2 | 2 | CH_oeu_15 | 4 | 4 | 0.000000000000456315 |
| Petunia axillaris | Peaxi162Scf00095 | 2 | CH_pax_94 | 3 | 7 | 0.000000259843 |
| Populus trichocarpa | Chr08 | 2 | CH_ptr_319 | 2 | 2 | 0.0000578001 |
| Quercus lobata | 6 | 2 | CH_qlo_191 | 4 | 5 | 0.00000000000206439 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_612 | 2 | 2 | 0.000119596 |
| Salvia bowleyana | GWHASIU00000007 | 2 | CH_sbo_290 | 2 | 2 | 0.000045498 |
| Salix brachista | GWHAAZH00000008 | 2 | CH_sbr_267 | 2 | 3 | 0.000189036 |
| Simmondsia chinensis | GWHAASQ00000025 | 2 | CH_sci_204 | 2 | 3 | 0.000255417 |
| Sequoiadendron giganteum | chr11 | 2 | CH_sgi_1042 | 2 | 3 | 0.000146142 |
| Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_57 | 5 | 15 | 0.000000000000267265 |
| Schrenkiella parvula | ch6-6 | 2 | CH_spa_181 | 2 | 2 | 0.000078734 |
| Solanum pennellii | Spenn-ch01 | 2 | CH_spe_131 | 3 | 4 | 0.0000000474804 |
| Solanum tuberosum | ST4.03ch01 | 2 | CH_stu_629 | 2 | 4 | 0.000922336 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_591 | 2 | CH_tpr_96 | 3 | 4 | 0.000000137518 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_87 | 3 | 3 | 0.0000000129529 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |