Functional clusters
Information
- Type MapMan
- Description Nucleotide metabolism.purines.ribonucleotide (RN) anabolism
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Anthoceros agrestis | Sc2ySwM_368 | 1 | CH_aag_177 | 3 | 12 | 0.000606077 |
Physcomitrium patens | scaffold_32 | 1 | CH_ppa_55 | 3 | 3 | 0.00000545709 |
Papaver somniferum | NC_039365.1 | 1 | CH_pso_512 | 3 | 8 | 0.000191311 |
Rhododendron simsii | chr04 | 1 | CH_rsi_142 | 6 | 39 | 0.00000000603568 |
Anthoceros agrestis | Sc2ySwM_368 | 2 | CH_aag_177 | 3 | 12 | 0.000606077 |
Physcomitrium patens | scaffold_32 | 2 | CH_ppa_55 | 3 | 3 | 0.00000545709 |
Papaver somniferum | NC_039365.1 | 2 | CH_pso_512 | 3 | 8 | 0.000191311 |
Rhododendron simsii | chr04 | 2 | CH_rsi_142 | 6 | 39 | 0.00000000603568 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
6.1.1.1 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.phosphoribosyldiphosphate 5-amidotransferase | 10 |
6.1.1.10 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate synthase | 8 |
6.1.1.2 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.glycinamide RN synthetase (GARS) | 3 |
6.1.1.3 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.glycinamide RN transformylase | 4 |
6.1.1.4 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.formylglycinamidine RN synthase | 10 |
6.1.1.5 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN synthase | 20 |
6.1.1.6 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase | 22 |
6.1.1.7 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.N-succinyl 5-aminoimidazole-4-carboxamide RN synthase | 7 |
6.1.1.8 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate lyase | 12 |
6.1.1.9 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.bifunctional 5-aminoimidazole-4-carboxamide RN transformylase and IMP cyclohydrolase | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |