Functional clusters

Information

  • Type MapMan
  • Description Nucleotide metabolism.purines.ribonucleotide (RN) anabolism

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_177 3 12 0.000606077
Physcomitrium patens scaffold_32 1 CH_ppa_55 3 3 0.00000545709
Papaver somniferum NC_039365.1 1 CH_pso_512 3 8 0.000191311
Rhododendron simsii chr04 1 CH_rsi_142 6 39 0.00000000603568
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_177 3 12 0.000606077
Physcomitrium patens scaffold_32 2 CH_ppa_55 3 3 0.00000545709
Papaver somniferum NC_039365.1 2 CH_pso_512 3 8 0.000191311
Rhododendron simsii chr04 2 CH_rsi_142 6 39 0.00000000603568

Available child term results

Ontology identifier Description Number of clusters
6.1.1.1 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.phosphoribosyldiphosphate 5-amidotransferase 10
6.1.1.10 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate synthase 8
6.1.1.2 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.glycinamide RN synthetase (GARS) 3
6.1.1.3 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.glycinamide RN transformylase 4
6.1.1.4 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.formylglycinamidine RN synthase 10
6.1.1.5 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN synthase 20
6.1.1.6 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase 22
6.1.1.7 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.N-succinyl 5-aminoimidazole-4-carboxamide RN synthase 7
6.1.1.8 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate lyase 12
6.1.1.9 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.bifunctional 5-aminoimidazole-4-carboxamide RN transformylase and IMP cyclohydrolase 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001