Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 1 | CH_acertr_569 | 2 | 2 | 0.00070497 |
| Arabidopsis lyrata | scaffold_4 | 1 | CH_aly_460 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrB02 | 1 | CH_bca_324 | 3 | 3 | 0.000000466096 |
| Camellia sinensis var. sinensis | Chr12 | 1 | CH_camsi_419 | 3 | 9 | 0.00000529645 |
| Cicer arietinum L. | Ca_LG4_v3 | 1 | CH_car_315 | 2 | 2 | 0.000778301 |
| Helianthus annuus | HanXRQChr13 | 1 | CH_han_384 | 3 | 9 | 0.000015795 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 1 | CH_rch_793 | 3 | 47 | 0.000770899 |
| Acer truncatum | chr2 | 2 | CH_acertr_569 | 2 | 2 | 0.00070497 |
| Arabidopsis lyrata | scaffold_4 | 2 | CH_aly_460 | 2 | 2 | 0.000990066 |
| Brassica carinata | ChrB02 | 2 | CH_bca_324 | 3 | 3 | 0.000000466096 |
| Camellia sinensis var. sinensis | Chr12 | 2 | CH_camsi_419 | 3 | 9 | 0.00000529645 |
| Cicer arietinum L. | Ca_LG4_v3 | 2 | CH_car_315 | 2 | 2 | 0.000778301 |
| Eucalyptus grandis | Chr06 | 2 | CH_egr_848 | 2 | 2 | 0.000351165 |
| Helianthus annuus | HanXRQChr13 | 2 | CH_han_384 | 3 | 9 | 0.000015795 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 2 | CH_rch_793 | 3 | 47 | 0.000770899 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |