Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid droplet-associated activities.peroxygenase (CALEOSIN/CLO/PXG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 1 CH_acertr_511 2 2 0.000422982
Aquilegia oxysepala CHR02 1 CH_aox_103 3 6 0.00000385776
Arabidopsis thaliana Chr1 1 CH_ath_425 2 2 0.000802177
Arabidopsis thaliana Chr1 1 CH_ath_426 2 2 0.000802177
Cannabis sativa NC_044373.1 1 CH_cansat_120 3 4 0.00000010348
Capsicum annuum PGAv.1.6.scaffold36 1 CH_can_416 2 2 0.000495663
Corylus avellana 2 1 CH_cav_153 3 5 0.00000176309
Chara braunii BFEA01000185 1 CH_cbr_135 2 3 0.000647303
Coffea canephora chr3 1 CH_ccan_219 2 4 0.0000766598
Carpinus fangiana Cfa02 1 CH_cfa_34 5 9 0.000000000000652758
Carica papaya supercontig_2 1 CH_cpa_320 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_4329 1 CH_cqu_152 3 3 0.000000117869
Daucus carota DCARv2_Chr9 1 CH_dca_488 2 2 0.000956663
Durio zibethinus NW_019168026.1 1 CH_dzi_133 3 4 0.00000154653
Gossypium hirsutum A09 1 CH_ghi_168 4 5 0.00000000170883
Gossypium hirsutum D09 1 CH_ghi_330 3 3 0.0000014224
Glycine max Gm09 1 CH_gma_99 4 8 0.00000000080359
Gossypium raimondii Chr06 1 CH_gra_155 3 3 0.000000362147
Lupinus albus Lalb_Chr10 1 CH_lal_4 9 9 1.63462e-28
Lotus japonicus chr2 1 CH_lja_146 3 4 0.000000306785
Lonicera japonica GWHAAZE00000003 1 CH_lonja_110 4 5 0.000000000112761
Manihot esculenta Chromosome17 1 CH_mes_32 6 6 5.35017e-19
Olea europaea scaffold69 1 CH_oeu_271 2 2 0.000160137
Oryza sativa ssp. japonica chr06 1 CH_osa_129 3 3 0.00000035144
Oryza sativa ssp. japonica chr02 1 CH_osa_130 3 3 0.00000035144
Pisum sativum chr6LG2 1 CH_psa_41 4 7 0.000000000074513
Papaver somniferum NW_020624376.1 1 CH_pso_601 3 20 0.000393953
Phaseolus vulgaris Chr03 1 CH_pvu_137 3 4 0.000000129554
Salvia bowleyana GWHASIU00000006 1 CH_sbo_405 2 3 0.000409466
Sechium edule LG06 1 CH_sed_268 2 2 0.000214026
Sequoiadendron giganteum chr1 1 CH_sgi_8 11 13 2.2911e-37
Solanum lycopersicum SL4.0ch01 1 CH_sly_567 2 2 0.000880411
Solanum pennellii Spenn-ch01 1 CH_spe_514 2 2 0.000667186
Theobroma cacao Chromosome_4 1 CH_tca_197 3 5 0.000000804466
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_383 2 2 0.000454184
Tripterygium wilfordii NC_052234.1 1 CH_twi_227 2 2 0.000167252
Acer truncatum chr11 2 CH_acertr_511 2 2 0.000422982
Aquilegia oxysepala CHR02 2 CH_aox_103 3 6 0.00000385776
Arabidopsis thaliana Chr1 2 CH_ath_425 2 2 0.000802177
Arabidopsis thaliana Chr1 2 CH_ath_426 2 2 0.000802177
Cannabis sativa NC_044373.1 2 CH_cansat_120 3 4 0.00000010348
Capsicum annuum PGAv.1.6.scaffold36 2 CH_can_416 2 2 0.000495663
Corylus avellana 2 2 CH_cav_153 3 5 0.00000176309
Chara braunii BFEA01000185 2 CH_cbr_135 2 3 0.000647303
Coffea canephora chr3 2 CH_ccan_219 2 4 0.0000766598
Carpinus fangiana Cfa02 2 CH_cfa_34 5 9 0.000000000000652758
Carica papaya supercontig_2 2 CH_cpa_320 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_4329 2 CH_cqu_152 3 3 0.000000117869
Daucus carota DCARv2_Chr9 2 CH_dca_488 2 2 0.000956663
Durio zibethinus NW_019168026.1 2 CH_dzi_133 3 4 0.00000154653
Gossypium hirsutum A09 2 CH_ghi_168 4 5 0.00000000170883
Gossypium hirsutum D09 2 CH_ghi_330 3 3 0.0000014224
Glycine max Gm09 2 CH_gma_99 4 8 0.00000000080359
Gossypium raimondii Chr06 2 CH_gra_155 3 3 0.000000362147
Lupinus albus Lalb_Chr10 2 CH_lal_4 9 9 1.63462e-28
Lotus japonicus chr2 2 CH_lja_146 3 4 0.000000306785
Lonicera japonica GWHAAZE00000003 2 CH_lonja_110 4 5 0.000000000112761
Manihot esculenta Chromosome17 2 CH_mes_32 6 6 5.35017e-19
Olea europaea scaffold69 2 CH_oeu_271 2 2 0.000160137
Oryza sativa ssp. japonica chr06 2 CH_osa_129 3 3 0.00000035144
Oryza sativa ssp. japonica chr02 2 CH_osa_130 3 3 0.00000035144
Pisum sativum chr6LG2 2 CH_psa_41 4 7 0.000000000074513
Papaver somniferum NW_020624376.1 2 CH_pso_601 3 20 0.000393953
Phaseolus vulgaris Chr03 2 CH_pvu_137 3 4 0.000000129554
Salvia bowleyana GWHASIU00000006 2 CH_sbo_405 2 3 0.000409466
Sechium edule LG06 2 CH_sed_268 2 2 0.000214026
Sequoiadendron giganteum chr1 2 CH_sgi_8 11 13 2.2911e-37
Solanum lycopersicum SL4.0ch01 2 CH_sly_567 2 2 0.000880411
Solanum pennellii Spenn-ch01 2 CH_spe_514 2 2 0.000667186
Theobroma cacao Chromosome_4 2 CH_tca_197 3 5 0.000000804466
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_383 2 2 0.000454184
Tripterygium wilfordii NC_052234.1 2 CH_twi_227 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001