Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid droplet-associated activities.lipid droplet structural protein (OLEOSIN/OLO)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 1 | CH_aar_105 | 3 | 4 | 0.00000823789 |
| Arabidopsis lyrata | scaffold_6 | 1 | CH_aly_13 | 7 | 11 | 2.4566e-17 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_8 | 8 | 13 | 1.56067e-22 |
| Brassica carinata | ChrB01 | 1 | CH_bca_153 | 4 | 4 | 0.00000000397817 |
| Brassica carinata | ChrC06 | 1 | CH_bca_17 | 9 | 68 | 0.00000000000000211595 |
| Brassica carinata | ChrC04 | 1 | CH_bca_468 | 3 | 3 | 0.0000090779 |
| Brassica napus | C02 | 1 | CH_bna_192 | 4 | 6 | 0.0000000777271 |
| Brassica napus | C03 | 1 | CH_bna_451 | 3 | 4 | 0.0000456198 |
| Brassica napus | A03 | 1 | CH_bna_52 | 5 | 5 | 0.00000000000230888 |
| Brassica napus | C09 | 1 | CH_bna_53 | 5 | 5 | 0.00000000000230888 |
| Brassica napus | A10 | 1 | CH_bna_73 | 5 | 7 | 0.0000000000484503 |
| Brassica oleracea | C3 | 1 | CH_bol_217 | 3 | 4 | 0.0000209937 |
| Brassica oleracea | C9 | 1 | CH_bol_30 | 5 | 5 | 0.000000000000841442 |
| Brassica oleracea | C2 | 1 | CH_bol_87 | 4 | 6 | 0.000000032156 |
| Brassica rapa | A03 | 1 | CH_bra_188 | 3 | 4 | 0.0000362134 |
| Brassica rapa | A10 | 1 | CH_bra_36 | 5 | 5 | 0.00000000000250427 |
| Brassica rapa | A02 | 1 | CH_bra_65 | 4 | 4 | 0.00000000486068 |
| Cardamine hirsuta | Chr6 | 1 | CH_chi_44 | 5 | 5 | 0.000000000000514201 |
| Capsella rubella | scaffold_6 | 1 | CH_cru_13 | 7 | 9 | 4.95439e-18 |
| Eutrema salsugineum | scaffold_2 | 1 | CH_esa_8 | 7 | 7 | 1.75768e-19 |
| Fragaria x ananassa | Fvb2-3 | 1 | CH_fan_235 | 3 | 4 | 0.00000316321 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 1 | CH_rch_271 | 3 | 3 | 0.000000133499 |
| Salvia bowleyana | GWHASIU00000001 | 1 | CH_sbo_460 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_189 | 5 | 8 | 0.000000000000049671 |
| Schrenkiella parvula | ch6-6 | 1 | CH_spa_9 | 6 | 6 | 3.40854e-16 |
| Aethionema arabicum | LG-3 | 2 | CH_aar_105 | 3 | 4 | 0.00000823789 |
| Arabidopsis lyrata | scaffold_6 | 2 | CH_aly_13 | 7 | 11 | 2.4566e-17 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_8 | 8 | 13 | 1.56067e-22 |
| Brassica carinata | ChrB01 | 2 | CH_bca_153 | 4 | 4 | 0.00000000397817 |
| Brassica carinata | ChrC06 | 2 | CH_bca_17 | 9 | 68 | 0.00000000000000211595 |
| Brassica carinata | ChrC04 | 2 | CH_bca_468 | 3 | 3 | 0.0000090779 |
| Brassica oleracea | C3 | 2 | CH_bol_217 | 3 | 4 | 0.0000209937 |
| Brassica oleracea | C9 | 2 | CH_bol_30 | 5 | 5 | 0.000000000000841442 |
| Brassica oleracea | C2 | 2 | CH_bol_87 | 4 | 6 | 0.000000032156 |
| Brassica rapa | A03 | 2 | CH_bra_188 | 3 | 4 | 0.0000362134 |
| Brassica rapa | A10 | 2 | CH_bra_36 | 5 | 5 | 0.00000000000250427 |
| Brassica rapa | A02 | 2 | CH_bra_65 | 4 | 4 | 0.00000000486068 |
| Cardamine hirsuta | Chr6 | 2 | CH_chi_44 | 5 | 5 | 0.000000000000514201 |
| Capsella rubella | scaffold_6 | 2 | CH_cru_13 | 7 | 9 | 4.95439e-18 |
| Eutrema salsugineum | scaffold_2 | 2 | CH_esa_8 | 7 | 7 | 1.75768e-19 |
| Fragaria x ananassa | Fvb2-3 | 2 | CH_fan_235 | 3 | 4 | 0.00000316321 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 2 | CH_rch_271 | 3 | 3 | 0.000000133499 |
| Salvia bowleyana | GWHASIU00000001 | 2 | CH_sbo_460 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_189 | 5 | 8 | 0.000000000000049671 |
| Schrenkiella parvula | ch6-6 | 2 | CH_spa_9 | 6 | 6 | 3.40854e-16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |