Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.long-chain acyl-CoA synthetase (LACS9)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 5 1 CH_cav_372 2 2 0.000230008
Corchorus olitorius AWUE01016709.1 1 CH_col_106 2 3 0.000876168
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_707 2 3 0.000358775
Sequoiadendron giganteum chr3 1 CH_sgi_1282 2 3 0.000438418
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_381 2 2 0.000557543
Corylus avellana 5 2 CH_cav_372 2 2 0.000230008
Corchorus olitorius AWUE01016709.1 2 CH_col_106 2 3 0.000876168
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_707 2 3 0.000358775
Sequoiadendron giganteum chr3 2 CH_sgi_1282 2 3 0.000438418
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_381 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001