Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Cannabis sativa | NC_044371.1 | 1 | CH_cansat_98 | 4 | 16 | 0.0000000231669 |
Fragaria vesca | Fvb7 | 1 | CH_fve_460 | 2 | 2 | 0.000589102 |
Physcomitrium patens | Chr24 | 1 | CH_ppa_257 | 2 | 2 | 0.000367636 |
Prunus persica | Pp02 | 1 | CH_ppe_470 | 2 | 2 | 0.000447577 |
Rosa chinensis | RcHm_v2.0_Chr1 | 1 | CH_rch_736 | 2 | 2 | 0.000398653 |
Schrenkiella parvula | ch6-6 | 1 | CH_spa_266 | 2 | 2 | 0.000472404 |
Vanilla planifolia | CM028152.1 | 1 | CH_vpl_374 | 2 | 2 | 0.00073888 |
Cannabis sativa | NC_044371.1 | 2 | CH_cansat_98 | 4 | 16 | 0.0000000231669 |
Fragaria vesca | Fvb7 | 2 | CH_fve_460 | 2 | 2 | 0.000589102 |
Physcomitrium patens | Chr24 | 2 | CH_ppa_257 | 2 | 2 | 0.000367636 |
Prunus persica | Pp02 | 2 | CH_ppe_470 | 2 | 2 | 0.000447577 |
Rosa chinensis | RcHm_v2.0_Chr1 | 2 | CH_rch_736 | 2 | 2 | 0.000398653 |
Schrenkiella parvula | ch6-6 | 2 | CH_spa_266 | 2 | 2 | 0.000472404 |
Vanilla planifolia | CM028152.1 | 2 | CH_vpl_374 | 2 | 2 | 0.00073888 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |