Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid trafficking

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr6 1 CH_ccan_202 3 15 0.0000509018
Coffea canephora chr6 2 CH_ccan_202 3 15 0.0000509018

Available child term results

Ontology identifier Description Number of clusters
5.8.1.1 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.lipid transfer protein (ORP3a) 10
5.8.1.2 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c) 14
5.8.2.1.2 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.phospholipid transverse translocation.phospholipid scramblase 10
5.8.2.2.1 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.TGD lipid importer complex.permease component TGD1 8
5.8.2.2.2 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.TGD lipid importer complex.substrate binding component TGD2 11
5.8.2.2.3 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.TGD lipid importer complex.ATPase component TGD3 4
5.8.2.4 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.lipid trafficking cofactor (TGD5) 2
5.8.2.5 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.long-chain acyl-CoA synthetase (LACS9) 10
5.8.3 Lipid metabolism.lipid trafficking.fatty acid export protein (FAX) 8
5.8.4 Lipid metabolism.lipid trafficking.peroxisomal fatty acid transporter (PXA1) 4
5.8.5 Lipid metabolism.lipid trafficking.fatty acid transporter (ABCA) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001