Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.sphingolipid degradation.sphingosine kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_245 2 2 0.0000660044
Arabidopsis thaliana Chr4 1 CH_ath_230 2 2 0.0000286492
Cardamine hirsuta Chr7 1 CH_chi_259 2 2 0.0000691204
Capsella rubella scaffold_7 1 CH_cru_281 2 2 0.0000731154
Eutrema salsugineum scaffold_1 1 CH_esa_230 2 3 0.000228441
Schrenkiella parvula ch7-4 1 CH_spa_180 2 2 0.000078734
Arabidopsis lyrata scaffold_7 2 CH_aly_245 2 2 0.0000660044
Arabidopsis thaliana Chr4 2 CH_ath_230 2 2 0.0000286492
Cardamine hirsuta Chr7 2 CH_chi_259 2 2 0.0000691204
Capsella rubella scaffold_7 2 CH_cru_281 2 2 0.0000731154
Eucalyptus grandis Chr05 2 CH_egr_891 2 5 0.000585223
Eutrema salsugineum scaffold_1 2 CH_esa_230 2 3 0.000228441
Schrenkiella parvula ch7-4 2 CH_spa_180 2 2 0.000078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001