Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.malate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 1 CH_arhy_330 3 10 0.00000322564
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 1 CH_arhy_637 2 2 0.000449075
Capsicum annuum PGAv.1.6.scaffold352 1 CH_can_279 2 2 0.0000826105
Cicer arietinum L. Ca_LG7_v3 1 CH_car_257 2 4 0.000466944
Glycine max Gm17 1 CH_gma_382 2 2 0.000113867
Phaseolus vulgaris Chr03 1 CH_pvu_286 2 2 0.0000734727
Salvia bowleyana GWHASIU00000001 1 CH_sbo_418 2 2 0.00045498
Solanum lycopersicum SL4.0ch03 1 CH_sly_331 2 2 0.0000586941
Solanum pennellii Spenn-ch03 1 CH_spe_104 3 3 0.00000000296764
Solanum tuberosum ST4.03ch03 1 CH_stu_498 2 4 0.000307456
Vigna mungo CM024074.1 1 CH_vmu_206 2 2 0.0000646141
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 2 CH_arhy_330 3 10 0.00000322564
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 2 CH_arhy_637 2 2 0.000449075
Capsicum annuum PGAv.1.6.scaffold352 2 CH_can_279 2 2 0.0000826105
Cicer arietinum L. Ca_LG7_v3 2 CH_car_257 2 4 0.000466944
Glycine max Gm17 2 CH_gma_382 2 2 0.000113867
Phaseolus vulgaris Chr03 2 CH_pvu_286 2 2 0.0000734727
Salvia bowleyana GWHASIU00000001 2 CH_sbo_418 2 2 0.00045498
Solanum lycopersicum SL4.0ch03 2 CH_sly_331 2 2 0.0000586941
Solanum pennellii Spenn-ch03 2 CH_spe_104 3 3 0.00000000296764
Solanum tuberosum ST4.03ch03 2 CH_stu_498 2 4 0.000307456
Vigna mungo CM024074.1 2 CH_vmu_206 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001