Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.citrate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_5 1 CH_aly_317 2 2 0.000198013
Arabidopsis thaliana Chr3 1 CH_ath_272 2 2 0.0000859476
Brassica carinata ChrC07 1 CH_bca_710 2 2 0.000128259
Brassica napus C08 1 CH_bna_198 3 3 0.000000113573
Brassica rapa A09 1 CH_bra_318 2 2 0.000429314
Cardamine hirsuta Chr5 1 CH_chi_106 3 3 0.0000000286668
Eutrema salsugineum scaffold_19 1 CH_esa_252 2 2 0.00022845
Selaginella moellendorffii scaffold_14 1 CH_smo_120 2 2 0.000280112
Schrenkiella parvula ch5-1 1 CH_spa_75 3 3 0.0000000371957
Arabidopsis lyrata scaffold_5 2 CH_aly_317 2 2 0.000198013
Arabidopsis thaliana Chr3 2 CH_ath_272 2 2 0.0000859476
Brassica carinata ChrC07 2 CH_bca_710 2 2 0.000128259
Brassica rapa A09 2 CH_bra_318 2 2 0.000429314
Cardamine hirsuta Chr5 2 CH_chi_106 3 3 0.0000000286668
Eutrema salsugineum scaffold_19 2 CH_esa_252 2 2 0.00022845
Selaginella moellendorffii scaffold_14 2 CH_smo_120 2 2 0.000280112
Schrenkiella parvula ch5-1 2 CH_spa_75 3 3 0.0000000371957

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001