Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.fatty acid degradation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum D01 1 CH_ghi_393 6 47 0.00000597916
Gossypium raimondii Chr02 1 CH_gra_195 6 47 0.00000369718
Sapria himalayana scaffold1_25991295 1 CH_shi_134 3 9 0.000117655
Gossypium hirsutum D01 2 CH_ghi_393 6 47 0.00000597916
Gossypium raimondii Chr02 2 CH_gra_195 6 47 0.00000369718
Sapria himalayana scaffold1_25991295 2 CH_shi_134 3 9 0.000117655

Available child term results

Ontology identifier Description Number of clusters
5.7.3.1 Lipid metabolism.lipid degradation.fatty acid degradation.peroxisomal long-chain acyl-CoA synthetase (LACS6/7) 4
5.7.3.2.1 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.acyl CoA oxidase (ACX) 20
5.7.3.2.2 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.multifunctional enzyme (MFP) 34
5.7.3.2.3 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.3-ketoacyl-CoA thiolase (KAT) 6
5.7.3.3.1 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctional enoyl-CoA hydratase 8
5.7.3.3.2 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase 4
5.7.3.4.1 Lipid metabolism.lipid degradation.fatty acid degradation.alpha-oxidation.alpha dioxygenase 62
5.7.3.5.1 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dodecenoyl-CoA isomerase 73
5.7.3.5.2 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dienoyl-CoA isomerase 5
5.7.3.5.3 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dienoyl-CoA reductase 8
5.7.3.5.4 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.acyl-CoA thioesterase 47
5.7.3.6 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle 4
5.7.3.6.1 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.citrate synthase 17
5.7.3.6.2 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.aconitase 17
5.7.3.6.3 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.isocitrate lyase 18
5.7.3.6.4 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.malate synthase 22
5.7.3.6.5 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal NAD-dependent malate dehydrogenase 3
5.7.3.6.6.1 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.acetate-malate shunt.peroxisomal acetyl-CoA synthetase (ACN/BZU) 20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001