Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.phospholipase C (nPLC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_184 3 7 0.0000045726
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 1 CH_amhyb_237 2 2 0.000505051
Arabidopsis thaliana Chr3 1 CH_ath_170 3 8 0.0000013786
Citrus clementina scaffold_4 1 CH_ccl_487 2 2 0.000820311
Carpinus fangiana Cfa04 1 CH_cfa_389 2 2 0.000757346
Cardamine hirsuta Chr3 1 CH_chi_128 3 3 0.000000143334
Chenopodium quinoa C_Quinoa_Scaffold_1352 1 CH_cqu_192 3 3 0.000000555667
Capsella rubella scaffold_3 1 CH_cru_143 3 3 0.000000160382
Eutrema salsugineum scaffold_13 1 CH_esa_326 2 2 0.000761499
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_553 2 3 0.000925157
Nelumbo nucifera chr1 1 CH_nnu_116 3 3 0.00000047053
Physcomitrium patens Chr04 1 CH_ppa_331 2 2 0.000919089
Prunus persica Pp02 1 CH_ppe_508 2 2 0.000745962
Sequoiadendron giganteum chr10 1 CH_sgi_544 3 3 0.000000199351
Schrenkiella parvula ch3-1 1 CH_spa_293 2 2 0.00078734
Trochodendron aralioides group1 1 CH_tar_555 2 2 0.000900549
Theobroma cacao Chromosome_5 1 CH_tca_438 2 2 0.000732386
Arabidopsis lyrata scaffold_3 2 CH_aly_184 3 7 0.0000045726
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 2 CH_amhyb_237 2 2 0.000505051
Arabidopsis thaliana Chr3 2 CH_ath_170 3 8 0.0000013786
Citrus clementina scaffold_4 2 CH_ccl_487 2 2 0.000820311
Carpinus fangiana Cfa04 2 CH_cfa_389 2 2 0.000757346
Cardamine hirsuta Chr3 2 CH_chi_128 3 3 0.000000143334
Chenopodium quinoa C_Quinoa_Scaffold_1352 2 CH_cqu_192 3 3 0.000000555667
Capsella rubella scaffold_3 2 CH_cru_143 3 3 0.000000160382
Eutrema salsugineum scaffold_13 2 CH_esa_326 2 2 0.000761499
Lotus japonicus chr3 2 CH_lja_411 2 2 0.000715077
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_553 2 3 0.000925157
Nelumbo nucifera chr1 2 CH_nnu_116 3 3 0.00000047053
Physcomitrium patens Chr04 2 CH_ppa_331 2 2 0.000919089
Prunus persica Pp02 2 CH_ppe_508 2 2 0.000745962
Sequoiadendron giganteum chr10 2 CH_sgi_544 3 3 0.000000199351
Schrenkiella parvula ch3-1 2 CH_spa_293 2 2 0.00078734
Trochodendron aralioides group1 2 CH_tar_555 2 2 0.000900549
Theobroma cacao Chromosome_5 2 CH_tca_438 2 2 0.000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001