Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (sPLA2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_366 2 2 0.000396027
Aquilegia oxysepala CHR07 1 CH_aox_323 2 3 0.000721742
Arabidopsis thaliana Chr4 1 CH_ath_310 2 2 0.000171895
Brassica carinata ChrC04 1 CH_bca_993 2 2 0.00059854
Cardamine hirsuta Chr3 1 CH_chi_363 2 2 0.000414723
Carya illinoinensis Chr06 1 CH_cil_229 3 4 0.000000230502
Capsella rubella scaffold_7 1 CH_cru_370 2 2 0.000438693
Medicago truncatula chr6 1 CH_mtr_150 4 6 0.000000000046814
Nelumbo nucifera chr8 1 CH_nnu_329 2 2 0.000130804
Rhododendron simsii chr01 1 CH_rsi_171 3 3 0.0000000624652
Sechium edule LG12 1 CH_sed_301 2 2 0.000428052
Sequoiadendron giganteum chr1 1 CH_sgi_175 5 6 0.0000000000000141933
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_112 3 3 0.000000129529
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_428 2 2 0.000929238
Arabidopsis lyrata scaffold_7 2 CH_aly_366 2 2 0.000396027
Aquilegia oxysepala CHR07 2 CH_aox_323 2 3 0.000721742
Arabidopsis thaliana Chr4 2 CH_ath_310 2 2 0.000171895
Brassica carinata ChrC04 2 CH_bca_993 2 2 0.00059854
Cardamine hirsuta Chr3 2 CH_chi_363 2 2 0.000414723
Carya illinoinensis Chr06 2 CH_cil_229 3 4 0.000000230502
Capsella rubella scaffold_7 2 CH_cru_370 2 2 0.000438693
Lotus japonicus chr2 2 CH_lja_288 3 31 0.000137671
Nelumbo nucifera chr8 2 CH_nnu_329 2 2 0.000130804
Rhododendron simsii chr01 2 CH_rsi_171 3 3 0.0000000624652
Sechium edule LG12 2 CH_sed_301 2 2 0.000428052
Sequoiadendron giganteum chr1 2 CH_sgi_175 5 6 0.0000000000000141933
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_112 3 3 0.000000129529
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_428 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001