Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid A biosynthesis.UDP-3-O-acyl N-acetylglucosamine deacetylase (LpxC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_97 4 48 0.0000000137183
Camellia sinensis var. sinensis Chr6 1 CH_camsi_558 2 2 0.0000458547
Nelumbo nucifera chr3 1 CH_nnu_292 2 2 0.0000436015
Quercus lobata 3 1 CH_qlo_1044 2 4 0.00092924
Sechium edule LG04 1 CH_sed_216 2 2 0.0000713419
Trochodendron aralioides group0 1 CH_tar_282 2 2 0.0000600366
Arabidopsis thaliana Chr1 2 CH_ath_97 4 48 0.0000000137183
Camellia sinensis var. sinensis Chr6 2 CH_camsi_558 2 2 0.0000458547
Nelumbo nucifera chr3 2 CH_nnu_292 2 2 0.0000436015
Quercus lobata 3 2 CH_qlo_1044 2 4 0.00092924
Sechium edule LG04 2 CH_sed_216 2 2 0.0000713419
Trochodendron aralioides group0 2 CH_tar_282 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001