Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.3-beta hydroxysteroid dehydrogenase component CSD

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold809 1 CH_can_357 2 2 0.000247831
Carya illinoinensis Chr04 1 CH_cil_441 2 2 0.000185948
Lonicera japonica GWHAAZE00000003 1 CH_lonja_494 2 2 0.000179662
Oryza sativa ssp. japonica chr03 1 CH_osa_278 2 2 0.000158437
Tarenaya hassleriana NW_010966177.1 1 CH_tha_216 2 2 0.00069847
Zea mays 1 1 CH_zma_294 2 4 0.000920285
Capsicum annuum PGAv.1.6.scaffold809 2 CH_can_357 2 2 0.000247831
Carya illinoinensis Chr04 2 CH_cil_441 2 2 0.000185948
Lonicera japonica GWHAAZE00000003 2 CH_lonja_494 2 2 0.000179662
Oryza sativa ssp. japonica chr03 2 CH_osa_278 2 2 0.000158437
Tarenaya hassleriana NW_010966177.1 2 CH_tha_216 2 2 0.00069847
Zea mays 1 2 CH_zma_294 2 4 0.000920285

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001