Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis.glycosylinositol phosphorylceramide (GIPC) biosynthesis.GIPC N-acetylglucosamine transferase (GINT1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_342 2 2 0.000070497
Brassica carinata ChrC06 1 CH_bca_165 3 3 0.00000000685435
Carica papaya supercontig_128 1 CH_cpa_234 2 2 0.0000950661
Malus domestica Chr02 1 CH_mdo_500 2 2 0.000113763
Simmondsia chinensis GWHAASQ00000009 1 CH_sci_232 2 2 0.000255428
Selenicereus undatus Scaffold_33676 1 CH_sun_146 2 2 0.0000726639
Utricularia gibba unitig_748 1 CH_ugi_228 2 2 0.000220378
Acer truncatum chr12 2 CH_acertr_342 2 2 0.000070497
Brassica carinata ChrC06 2 CH_bca_165 3 3 0.00000000685435
Carica papaya supercontig_128 2 CH_cpa_234 2 2 0.0000950661
Malus domestica Chr02 2 CH_mdo_500 2 2 0.000113763
Simmondsia chinensis GWHAASQ00000009 2 CH_sci_232 2 2 0.000255428
Selenicereus undatus Scaffold_33676 2 CH_sun_146 2 2 0.0000726639
Utricularia gibba unitig_748 2 CH_ugi_228 2 2 0.000220378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001