Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr3 1 CH_ath_277 2 2 0.0000859476
Brassica carinata ChrC01 1 CH_bca_870 2 2 0.000320646
Brassica oleracea C3 1 CH_bol_281 2 2 0.0000980584
Brassica rapa A06 1 CH_bra_240 2 3 0.000128794
Citrus clementina scaffold_2 1 CH_ccl_330 2 2 0.0000820311
Cardamine hirsuta Chr5 1 CH_chi_400 2 3 0.000622048
Carya illinoinensis Chr11 1 CH_cil_366 2 2 0.0000619828
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_284 2 2 0.0000448722
Oryza sativa ssp. japonica chr01 1 CH_osa_80 3 3 0.0000000167352
Physcomitrium patens Chr05 1 CH_ppa_111 2 2 0.0000612726
Quercus lobata CM012294 1 CH_qlo_827 2 2 0.000154887
Salix brachista GWHAAZH00000015 1 CH_sbr_303 2 2 0.000189042
Zea mays 4 1 CH_zma_285 2 2 0.000766969
Arabidopsis thaliana Chr3 2 CH_ath_277 2 2 0.0000859476
Brassica carinata ChrC01 2 CH_bca_870 2 2 0.000320646
Brassica oleracea C3 2 CH_bol_281 2 2 0.0000980584
Brassica rapa A06 2 CH_bra_240 2 3 0.000128794
Citrus clementina scaffold_2 2 CH_ccl_330 2 2 0.0000820311
Cardamine hirsuta Chr5 2 CH_chi_400 2 3 0.000622048
Carya illinoinensis Chr11 2 CH_cil_366 2 2 0.0000619828
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_284 2 2 0.0000448722
Oryza sativa ssp. japonica chr01 2 CH_osa_80 3 3 0.0000000167352
Physcomitrium patens Chr05 2 CH_ppa_111 2 2 0.0000612726
Quercus lobata CM012294 2 CH_qlo_827 2 2 0.000154887
Salix brachista GWHAAZH00000015 2 CH_sbr_303 2 2 0.000189042
Zea mays 4 2 CH_zma_285 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001