Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.phosphatidylcholine.phosphatidylcholine:diacylglycerol cholinephosphotransferase (PDCT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_244 2 2 0.0000660044
Arabidopsis thaliana Chr3 1 CH_ath_229 2 2 0.0000286492
Camellia sinensis var. sinensis Chr2 1 CH_camsi_712 2 4 0.000275116
Cardamine hirsuta Chr3 1 CH_chi_258 2 2 0.0000691204
Capsella rubella scaffold_3 1 CH_cru_280 2 2 0.0000731154
Magnolia biondii Chr04 1 CH_mbi_595 2 5 0.000485625
Olea europaea chr10 1 CH_oeu_390 2 2 0.000533789
Olea europaea chr21 1 CH_oeu_70 3 4 0.000000170951
Prunus persica Pp03 1 CH_ppe_351 2 2 0.0000745962
Theobroma cacao Chromosome_6 1 CH_tca_166 3 7 0.000000281574
Arabidopsis lyrata scaffold_3 2 CH_aly_244 2 2 0.0000660044
Arabidopsis thaliana Chr3 2 CH_ath_229 2 2 0.0000286492
Camellia sinensis var. sinensis Chr2 2 CH_camsi_712 2 4 0.000275116
Cardamine hirsuta Chr3 2 CH_chi_258 2 2 0.0000691204
Capsella rubella scaffold_3 2 CH_cru_280 2 2 0.0000731154
Lotus japonicus chr3 2 CH_lja_303 2 3 0.000214516
Magnolia biondii Chr04 2 CH_mbi_595 2 5 0.000485625
Olea europaea chr10 2 CH_oeu_390 2 2 0.000533789
Olea europaea chr21 2 CH_oeu_70 3 4 0.000000170951
Prunus persica Pp03 2 CH_ppe_351 2 2 0.0000745962
Theobroma cacao Chromosome_6 2 CH_tca_166 3 7 0.000000281574

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001