Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.phosphatidylcholine.phospho-base N-methyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 1 CH_aar_91 3 4 0.00000174767
Brassica carinata ChrB07 1 CH_bca_280 3 3 0.000000249498
Cannabis sativa NC_044372.1 1 CH_cansat_245 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold423 1 CH_can_356 2 2 0.000247831
Corylus avellana 7 1 CH_cav_278 2 2 0.0000766695
Cucumis melo chr02 1 CH_cme_249 2 2 0.000200133
Chenopodium quinoa C_Quinoa_Scaffold_1817 1 CH_cqu_379 2 2 0.000142146
Capsella rubella scaffold_1 1 CH_cru_133 3 3 0.000000080191
Cucumis sativus L. chr1 1 CH_csa_274 2 2 0.000250428
Eutrema salsugineum scaffold_7 1 CH_esa_289 2 2 0.000456899
Glycine max Gm08 1 CH_gma_525 2 2 0.000379557
Punica granatum NC_045133.1 1 CH_pgr_224 2 2 0.0000750356
Papaver somniferum NC_039361.1 1 CH_pso_490 2 2 0.00013514
Populus trichocarpa Chr12 1 CH_ptr_394 2 3 0.0001734
Selenicereus undatus Scaffold_10417 1 CH_sun_186 2 3 0.000217984
Vitis vinifera chr1 1 CH_vvi_416 2 3 0.000684523
Aethionema arabicum LG-9 2 CH_aar_91 3 4 0.00000174767
Brassica carinata ChrB07 2 CH_bca_280 3 3 0.000000249498
Cannabis sativa NC_044372.1 2 CH_cansat_245 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold423 2 CH_can_356 2 2 0.000247831
Corylus avellana 7 2 CH_cav_278 2 2 0.0000766695
Cucumis melo chr02 2 CH_cme_249 2 2 0.000200133
Chenopodium quinoa C_Quinoa_Scaffold_1817 2 CH_cqu_379 2 2 0.000142146
Capsella rubella scaffold_1 2 CH_cru_133 3 3 0.000000080191
Cucumis sativus L. chr1 2 CH_csa_274 2 2 0.000250428
Eutrema salsugineum scaffold_7 2 CH_esa_289 2 2 0.000456899
Glycine max Gm08 2 CH_gma_525 2 2 0.000379557
Punica granatum NC_045133.1 2 CH_pgr_224 2 2 0.0000750356
Papaver somniferum NC_039361.1 2 CH_pso_490 2 2 0.00013514
Populus trichocarpa Chr12 2 CH_ptr_394 2 3 0.0001734
Selenicereus undatus Scaffold_10417 2 CH_sun_186 2 3 0.000217984
Vitis vinifera chr1 2 CH_vvi_416 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001