Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.glycerolipid biosynthesis.phosphatidate.mitochondrial lysophosphatidate biosynthesis.glycerol-3-phosphate acyltransferase (GPAT1-3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr5 1 CH_ccan_372 2 12 0.000843234
Daucus carota DCARv2_Chr3 1 CH_dca_46 4 4 0.0000000000272417
Erythranthe guttata scaffold_13 1 CH_egut_346 2 3 0.000218436
Magnolia biondii Chr18 1 CH_mbi_606 2 2 0.000485661
Nelumbo nucifera chr3 1 CH_nnu_87 3 4 0.0000000456254
Phaseolus vulgaris Chr08 1 CH_pvu_464 2 2 0.000734727
Theobroma cacao Chromosome_8 1 CH_tca_437 2 2 0.000732386
Tarenaya hassleriana NW_010969548.1 1 CH_tha_212 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG4 1 CH_tpr_234 2 2 0.0000756974
Coffea canephora chr5 2 CH_ccan_372 2 12 0.000843234
Daucus carota DCARv2_Chr3 2 CH_dca_46 4 4 0.0000000000272417
Eucalyptus grandis Chr06 2 CH_egr_781 2 2 0.000175582
Erythranthe guttata scaffold_13 2 CH_egut_346 2 3 0.000218436
Magnolia biondii Chr18 2 CH_mbi_606 2 2 0.000485661
Nelumbo nucifera chr3 2 CH_nnu_87 3 4 0.0000000456254
Phaseolus vulgaris Chr08 2 CH_pvu_464 2 2 0.000734727
Theobroma cacao Chromosome_8 2 CH_tca_437 2 2 0.000732386
Tarenaya hassleriana NW_010969548.1 2 CH_tha_212 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG4 2 CH_tpr_234 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001