Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.mitochondrial fatty acid synthase (mtFAS) system.enoyl-ACP reductase (mtER)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00023 1 CH_atr_103 3 10 0.000000530026
Camellia sinensis var. sinensis Chr4 1 CH_camsi_376 3 17 0.00000214407
Capsicum annuum PGAv.1.6.scaffold84 1 CH_can_100 3 3 0.0000000102372
Helianthus annuus HanXRQChr05 1 CH_han_519 2 2 0.000115929
Petunia axillaris Peaxi162Scf00616 1 CH_pax_71 3 4 0.0000000296995
Solanum lycopersicum SL4.0ch11 1 CH_sly_428 2 2 0.000176082
Solanum pennellii Spenn-ch11 1 CH_spe_376 2 2 0.000133437
Amborella trichopoda AmTr_v1.0_scaffold00023 2 CH_atr_103 3 10 0.000000530026
Camellia sinensis var. sinensis Chr4 2 CH_camsi_376 3 17 0.00000214407
Capsicum annuum PGAv.1.6.scaffold84 2 CH_can_100 3 3 0.0000000102372
Eucalyptus grandis Chr02 2 CH_egr_701 2 2 0.0000585274
Helianthus annuus HanXRQChr05 2 CH_han_519 2 2 0.000115929
Petunia axillaris Peaxi162Scf00616 2 CH_pax_71 3 4 0.0000000296995
Solanum lycopersicum SL4.0ch11 2 CH_sly_428 2 2 0.000176082
Solanum pennellii Spenn-ch11 2 CH_spe_376 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001