Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.acyl carrier protein (ptACP)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eutrema salsugineum | scaffold_8 | 1 | CH_esa_129 | 3 | 8 | 0.00000973633 |
Lonicera japonica | GWHAAZE00000009 | 1 | CH_lonja_644 | 2 | 2 | 0.000898311 |
Sechium edule | LG04 | 1 | CH_sed_344 | 2 | 2 | 0.000713419 |
Sequoiadendron giganteum | chr6 | 1 | CH_sgi_1250 | 2 | 2 | 0.000292291 |
Sapria himalayana | scaffold26_7557582 | 1 | CH_shi_169 | 2 | 3 | 0.000171536 |
Eucalyptus grandis | Chr08 | 2 | CH_egr_503 | 4 | 27 | 0.00000073686 |
Eutrema salsugineum | scaffold_8 | 2 | CH_esa_129 | 3 | 8 | 0.00000973633 |
Lonicera japonica | GWHAAZE00000009 | 2 | CH_lonja_644 | 2 | 2 | 0.000898311 |
Sechium edule | LG04 | 2 | CH_sed_344 | 2 | 2 | 0.000713419 |
Sequoiadendron giganteum | chr6 | 2 | CH_sgi_1250 | 2 | 2 | 0.000292291 |
Sapria himalayana | scaffold26_7557582 | 2 | CH_shi_169 | 2 | 3 | 0.000171536 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |