Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_313 4 23 0.000110138
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_313 4 23 0.000110138

Available child term results

Ontology identifier Description Number of clusters
5.1.4.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.acyl carrier protein (ptACP) 11
5.1.4.2.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase (ptKAS) activities.ketoacyl-ACP synthase I 11
5.1.4.2.2 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase (ptKAS) activities.ketoacyl-ACP synthase II 4
5.1.4.2.3 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase (ptKAS) activities.ketoacyl-ACP synthase III 8
5.1.4.3 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 12
5.1.4.4 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase (KAR) 6
5.1.4.5 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.enoyl-ACP reductase (ER) 4
5.1.4.6.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.elongation of exogenous fatty acid chains.medium-chain acyl-ACP synthetase 13
5.1.4.7.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.termination of fatty acid chains.oleoyl-ACP thioesterase (FATA) 8
5.1.4.7.2 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.termination of fatty acid chains.palmitoyl-ACP thioesterase (FATB) 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001