Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.fatty acid biosynthesis.citrate shuttle.cytosolic NAD-dependent malate dehydrogenase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR05 | 1 | CH_aox_238 | 2 | 2 | 0.000240597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 1 | CH_arhy_777 | 2 | 3 | 0.000898109 |
| Daucus carota | DCARv2_Chr8 | 1 | CH_dca_376 | 2 | 2 | 0.000382665 |
| Eutrema salsugineum | scaffold_17 | 1 | CH_esa_288 | 2 | 2 | 0.000456899 |
| Manihot esculenta | Chromosome05 | 1 | CH_mes_470 | 2 | 2 | 0.000610631 |
| Populus trichocarpa | Chr02 | 1 | CH_ptr_450 | 2 | 2 | 0.000346801 |
| Vitis vinifera | chr7 | 1 | CH_vvi_355 | 2 | 2 | 0.000228189 |
| Aquilegia oxysepala | CHR05 | 2 | CH_aox_238 | 2 | 2 | 0.000240597 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 2 | CH_arhy_777 | 2 | 3 | 0.000898109 |
| Daucus carota | DCARv2_Chr8 | 2 | CH_dca_376 | 2 | 2 | 0.000382665 |
| Eucalyptus grandis | Chr05 | 2 | CH_egr_882 | 2 | 3 | 0.000526721 |
| Eutrema salsugineum | scaffold_17 | 2 | CH_esa_288 | 2 | 2 | 0.000456899 |
| Manihot esculenta | Chromosome05 | 2 | CH_mes_470 | 2 | 2 | 0.000610631 |
| Populus trichocarpa | Chr02 | 2 | CH_ptr_450 | 2 | 2 | 0.000346801 |
| Vitis vinifera | chr7 | 2 | CH_vvi_355 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |